Mus caroli (Ryukyu mouse): 110302367
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Entry
110302367 CDS
T05910
Symbol
Myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110302367 (Myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110302367 (Myo5c)
04131 Membrane trafficking [BR:
mcal04131
]
110302367 (Myo5c)
03029 Mitochondrial biogenesis [BR:
mcal03029
]
110302367 (Myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110302367 (Myo5c)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110302367 (Myo5c)
mRNA cycle factors
P-body specific factors
110302367 (Myo5c)
Membrane trafficking [BR:
mcal04131
]
Others
Actin-binding proteins
Myosins
110302367 (Myo5c)
Mitochondrial biogenesis [BR:
mcal03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110302367 (Myo5c)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
110302367 (Myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
110302367
NCBI-ProteinID:
XP_029336986
Ensembl:
MGP_CAROLIEiJ_G0032438
UniProt:
A0A6P7R8N2
LinkDB
All DBs
Position
9:72253790..72328275
Genome browser
AA seq
1747 aa
AA seq
DB search
MAVAELYAQYNRVWIPDPEEVWKSAEIAKDYREGDRVLRLLLEDGTELEYPVDPGSLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSNNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGNTVIEGVNDR
ADMVETQKTFALLGKRHQGFKKDFQMDIFKILAAILHLGNVQVTTVGNERSSVSEDDSHL
KVFCELLGLETSKVAQWLCNRKIVTSSETVVKPMTRPQAINARDALAKKIYAHLFDFIVE
QINQALHFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEY
MKEDIPWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSL
FEKPRMSNSSFIIQHFADKVEYQCEGFLEKNRDTVYDMLVEILRASKFHLCAAFFQESPV
PSSPFGAMITVKSAKQVIKPNTKHFRTTVGNKFRSSLYLLMETLNATTPHYVRCIKPNDE
KMPFEFDSKRIVQQLRACGVLETIRISAQSYPSRWTYLEFYSRYGILMTQQELSLSDKKE
VCKVVLHRLIQDSNQYQFGRTKIFFRAGQVAYLEKLRLDKLRQDCIMIQKHVRGWLQRRR
FLRERQAALTIQRYFRGQQTVRKAITATALKEAWAAIILQKYCRGYLVRNLYQLIRVATI
TIQAHTRGFLARRRYRKLLQEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQ
KKLEDQNRENHGLVEKLTSLAALRVGDLEKVQKLEAELEKAATHRHNYEEKGRRYRDTVE
ERLSKLQKHNAELELQRERAEQMLQEKSEELKEKMDKLTRQLFDDVQKEEQQRLVLEKGF
ELKTQAYEKQIESLREEIKALKDERSQLHRQLEEGQVTSDSLKGEVARLSKQAKTISEFE
KEIELLQAQKIDVEKHVQSQKREMRERMSEVTKQLLESYDIEDVRSRLSVEDLEHLNEDG
ELWFAYEGLKKATRVLESHFQSQKDCYEKEIEGLNFKVVHLSQEINHLQKLFREETDINE
SIRHEVTRLTSENMMIPDFKQQISELERQKQDLESRLKEQAEKMEGKLEEPFSHLNRIRE
EERMQGRTVEAQSEMHPEEKERLVGTIQEPHEVIRFPKKQPEAEEEVESILQQEASRLSL
EKRDLEEELDMKDRMIRRLQDQVKTLTKTIEKANHVHLPSGSREYLGMLEYKKEDEGKLI
QNLILDLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSAINGIKHVVKEHF
EDLEMLSFWLSNTCHFLNCLKQYSGEEEFMKYNSPQQNKNCLNNFDLTEYRQILSDVAIR
IYHQFIIVMENNLQPIIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDAYTMTSILQQL
SYFYSTMCQNGLDPEIVRQAVKQLFYLVGAVTLNSLLLRKDMCSCRKGMQIRCNISFLEE
WLKDKNVQSSLAKETLEPLSQAAWLLQVKKTTDSDAKEIAQCCTSLSAVQIIKILNSYTP
IDDFEKRVNPSFVRKVQALLNNRGDSSQLMLDTKYLFQVTFPFTASPHALEMTQIPSSFK
LGFLRRL
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctctatgcgcagtacaacagggtttggatcccagatcctgaagaa
gtttggaagtcggctgaaatcgcaaaggactacagagagggtgaccgagtcctcagactt
ctgctggaggatggcacggagctggaataccctgttgacccagggtcactgcctccgctt
cggaaccctgacatcctggtgggtgagaatgacctcacagccctcagctacctccacgag
cctgcagtgctgcataatctcagaatccgcttcgcagagtccaaactcatctacacctac
agtggaatcattttggtggccatgaatccttacaaacagctaccaatatatggggatgcc
atcatccacgcctacagcggacagaacatgggtgacatggacccacacatctttgcagtt
gcagaggaggcctacaagcagatggccaggaacaatagaaatcagtccataatcgtgagt
ggagaatcgggagctgggaaaactgtctctgcacgctatgccatgaggtacttcgctacc
gtcagcaaatcaagcaacaatgcccacgtggaggacaaagtcctggcatccaatcccata
actgaggctgttggaaatgccaagaccacccgcaatgacaacagcagtcggtttgggaaa
tacacagagatcagctttgatgagagaaaccagatcattggcgccaatatgagaacctac
ctcctggagaagtccagagttgtctttcagtcagaaaatgaacggaattaccacatcttc
taccagctctgtgcatccgcacagcagtcagaatttaaacaccttaaactggggagtgcc
gaagagttcaactacacaagaatgggaggtaacactgtcattgaaggtgtcaatgacaga
gctgacatggtagagacccagaagaccttcgcactactgggtaagagacaccaaggattc
aagaaagactttcagatggatatttttaagatcctggctgccatcctgcacctgggcaat
gtgcaggtcaccacggtgggcaacgagaggtcttcagtcagtgaagatgacagtcacctg
aaggtgttctgtgagctcttgggcctggagaccagcaaagtggctcagtggctgtgcaac
agaaaaattgtgacctcctcggaaactgtggtaaagcccatgaccaggcctcaggccatc
aacgccagggatgcgctggccaaaaagatctacgctcacctgttcgacttcattgtcgag
caaatcaaccaggcgttgcacttctcaggcaagcagcacacttttattggtgttttggac
atttatggttttgagacctttgatgtaaacagctttgaacagttctgcatcaattacgct
aatgaaaaactacagcagcagtttaacctgcacgtctttaaacttgagcaagaggaatac
atgaaagaggacatcccctggactctgatagacttctatgacaaccagcctgttattgac
ctgatcgaggcaaaaatgggcattttggagttgctggatgaagaatgcttgttgcctcat
ggcaccgatgaaaactggcttcaaaagctgtataacaattttgtcaacaagaactcgtta
ttcgagaagcctagaatgtcaaactcatccttcatcatccaacattttgctgacaaggtg
gagtaccaatgtgaagggtttctggagaagaacagagacactgtctatgacatgctggtg
gagatcctcagagcaagcaagtttcatctctgtgccgccttttttcaagaaagccctgtt
ccgtcttctccctttggggcgatgatcacagttaaatctgcaaagcaggtcatcaagccg
aacaccaagcacttccggaccactgttgggaacaagttccgcagctctctgtacttgctc
atggaaaccctcaatgccaccacaccccactacgtccggtgcatcaagccaaatgatgag
aaaatgccctttgagtttgactccaagcggattgtccagcagctgcgagcctgtggcgtt
ttagaaacgattcgcatcagtgcccagagctacccttctaggtggacatacctcgagttc
tatagtcgctatggcatcctcatgacccagcaggagctgtccctcagtgataagaaggag
gtgtgcaaggtggttctgcacaggctcatccaggattctaaccagtaccagtttggtaga
accaaaattttcttcagagcaggacaagtggcttacttagagaaactccgcctggataaa
ctgagacaggattgtattatgatccagaaacacgtgcggggctggctccagaggaggagg
ttcctcagggagagacaggccgccctgaccatccagcggtacttccggggtcagcagaca
gtgaggaaggccatcactgccactgctttgaaggaggcctgggccgccatcatcctccag
aagtattgtcgaggctacctggtccgtaacctgtaccagctgatccgtgtggccaccatc
accatccaggcacacactaggggcttcctagccaggaggcggtaccggaagttgttgcag
gagcacaaggcagtgatcctgcagaagtatgcgagggcctggctggcccggcgcagattc
cagaacattcgcaggttcgtgctcaacattcagctgacttacagggtccagcgcttgcag
aagaagctggaggatcagaacagagagaaccacgggctggtggagaagctgaccagcctg
gctgctctgcgggttggcgatctggaaaaggttcagaagctggaagcagagctggaaaag
gcagctacccaccggcacaactatgaagagaagggccgcagatacagggacacagtggag
gagaggttgtcaaagctgcagaaacacaatgcagagctggagctgcagagagagcgagca
gagcagatgctgcaagagaagtctgaggagctaaaagaaaaaatggacaagctcaccagg
cagctgtttgatgacgtgcagaaagaagaacagcaaagactagttcttgaaaaaggtttt
gagctgaaaacgcaagcctatgagaaacagatagagtctctgagagaagagattaaagcc
ctcaaggacgagaggtcgcaactgcatcgccagctggaggagggacaggtcacctctgac
agcctgaagggggaggtggcccgcctaagcaagcaggcaaagaccatctctgagtttgag
aaggagatagagctgctgcaagcccagaagatagatgtggaaaagcacgtgcagtcacag
aaacgggagatgagagaacggatgtcagaggtcaccaagcagcttttggagagctatgac
attgaagatgtaagaagcaggctctccgtggaagatctggaacatttaaatgaagatgga
gaactttggtttgcctacgaaggactaaagaaagcaactcgagttctggagagccatttc
cagtctcagaaggattgctacgaaaaagagattgaaggtctgaacttcaaagtcgtgcac
ctgagccaagagatcaaccacctgcagaagctgttcagagaagagacagacatcaacgaa
agtatccggcatgaagtcaccaggctgacatcagaaaacatgatgatcccagactttaag
cagcagatttcagagctggagaggcagaagcaggatcttgaatcccgcctgaaggagcag
gctgagaagatggaaggaaagctggaagagccgttcagccacctgaaccgaatccgagaa
gaggagagaatgcagggcaggactgtggaagcacagagtgagatgcatcccgaagagaag
gagaggctggtgggtacgatccaagaaccgcatgaagtcatcaggttcccaaagaagcaa
ccagaagctgaggaggaagtcgagagtattctccaacaagaagcgtcccggctctctttg
gaaaagagggatcttgaggaagagttagacatgaaggacagaatgatcagaaggctacag
gatcaagtcaagactctgaccaagacgattgagaaagccaaccatgtgcacctgccctca
ggatccagggagtacctggggatgctggaatacaagaaagaagatgaggggaagctcatt
caaaacctcattcttgacctgaagccccgaggtgtggtggtgaacatgatcccagggctg
ccagctcacatcctgttcatgtgtgtgcgatatgcggactccctaaacgacgccaacatg
ctcaaatccctcatgaacagtgctattaacggcatcaagcatgtggttaaggaacatttt
gaagatttggagatgctgtccttctggctttccaacacttgccattttctcaactgcctg
aaacagtatagcggagaagaggaattcatgaagtataacagcccacagcagaataagaac
tgcttgaacaattttgatcttacagaatacagacagattctcagtgatgtggccatacgg
atttatcatcagttcatcattgtgatggaaaacaacctccagccgataatagtgccaggc
atgctggagtatgagagccttcagggcatttccggcctgaagcccactggtttccggaag
cgctcatccagcatcgacgacacagatgcctacaccatgacgtccatcctgcagcagctg
agctacttctacagcaccatgtgtcagaacggcctggaccccgagattgtgagacaggcg
gtcaagcagttgttctacctggtcggtgcggtgaccctcaacagcctcctcctgcgcaag
gacatgtgctcctgcaggaaaggcatgcagatcaggtgcaacatcagcttcttggaagaa
tggctaaaagataagaatgtgcagagcagcttagccaaggagacactggagcccctctct
caggcagcctggttgctgcaggtgaagaagaccacagacagtgatgccaaggagatcgcc
cagtgttgcacttccctgtctgctgtgcagatcataaagatccttaattcatacacacct
atagacgacttcgagaaaagagtcaatccatccttcgtccgcaaagtacaggctcttctg
aataaccggggcgactcgtcacagctgatgctggataccaaatatctttttcaagtcaca
tttcctttcaccgcctcaccacatgccctggagatgacccagatcccaagcagcttcaag
ctcggctttctccggagactgtag
DBGET
integrated database retrieval system
