Mus caroli (Ryukyu mouse): 110302413
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Entry
110302413 CDS
T05910
Symbol
U2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein
KO
K12842
U2-associated protein SR140
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110302413 (U2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mcal03041
]
110302413 (U2surp)
Spliceosome [BR:
mcal03041
]
Complex A
U2 snRNP components
U2 related factors
110302413 (U2surp)
Complex B
110302413 (U2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
SET_assoc
RRM_7
Motif
Other DBs
NCBI-GeneID:
110302413
NCBI-ProteinID:
XP_021028884
Ensembl:
MGP_CAROLIEiJ_G0032530
UniProt:
A0A6P5QF48
LinkDB
All DBs
Position
9:complement(91061311..91108344)
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AA seq
1075 aa
AA seq
DB search
MADKTPGGSQKASSKNRSSDVHSSGSSDAHMDASGPSDSDMPSRTRPKSPRKHNYRNESS
RESLCDSPHQNLSRPLLENKLKAFSIGKMSTAKRTLSKKEQEELKKKEDEKAAAEIYEEF
LAAFEGSDGNKVKTFVRGGVVNAAKDEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPP
SLLVIETKKPPLKKGEKEKKKSNLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDG
XRRSMDVPSRRNRSSGVLDDYAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPL
ASVKIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMSFEMKLGWGKAVPIPP
HPIYIPPSMMEHTLPPPPSGLPFNAQPRERLKNPNAPMLPPPKNKEDFEKTLSQAIVKVV
IPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKLYSI
LQGDSPTKWRTEDFRMFKNGSFWRPPPLNPYLHGMSEEQETEAFVEEPSKKGALKEEQRD
KLEEILRGLTPRKNDIGDAMVFCLNNAEAAEEIVDCITESLSILKTPLPKKIARLYLVSD
VLYNSSAKVANASYYRKLDLPCLSLSADLELSVEGSSQPRLPGGPGALGRLSRRSGCLPQ
DATRGGRPYGPQCEVCHYEDSATYDTVLSSCVQQRVMTCFRAWEDWAIYPEPFLIKLQNI
FLGLVNIIEEKETEDVPDDLDGAPIEEELDGAPLEDVDGIPIDATPIDDLDGVPIKSLDD
DLDGVPLDATEDSKKNEPIFKVAPSKWEAVDESELEAQAVTTSKWELFDQHEESEEEENQ
NQEEESEDEEDTQSSKSEEHHLYSNPVREEMTESKFSKYSEMSEEKRAKLREIELKVMKF
QDELESGKRPKKPGQSFQEQVEHYRDKLLQREKEKELERERERDKKDKEKLESRSKDKKE
KDECTPTRKERKRRHSTSPSPSRSXSGRRVKSPSPKSERSXRSERSHKESSRSRSSHKDS
PRDASKKAKRSPSGSRTPKRSRRSRSRSPKKSGKKSRSQSRSPHRSHKKSKKNKH
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaacgccaggcggatctcagaaggccagttcaaagaaccgatcatcggat
gtccattcatctggatcttcagatgcacatatggatgcatctggaccctcagatagtgat
atgccaagtcgaacacgacctaaaagcccaagaaaacacaattataggaatgaaagttcc
cgngaaagcctttgcgattctcctcatcagaatctctcaagacctcttctagaaaacaag
cttaaagcattcagtattggaaaaatgagcacagcaaagcgaactctaagtaagaaggaa
caagaggaactgaagaaaaaggaggatgagaaggcagctgctgaaatttatgaggaattt
cttgctgcttttgaaggaagtgatggtaataaagtgaaaacgtttgttcgaggcggggtc
gttaatgcagctaaagatgaacatgaaacagacgaaaaaagaggtaaaatctataaacca
tcttcaaggtttgcagatcaaaaaaatcctccaaatcagtcatccaatgaaaggccgccn
tctcttcttgtgatagagacgaaaaaacccccactgaaaaaaggggagaaggaaaagaaa
aaaagcaatttggaacttttcaaagaagaactaaaacaaattcaggaagaacgtgatgaa
agacataaaacaaaaggcaggttaagtcggtttgagcctcctcagtcagactctgatggt
cancgacgttctatggatgtgccttcaagaagaaatcgatcgtctggtgttcttgatgat
tatgcacctggctcacatgatgtaggagatcccagcactacaaatttataccttggaaac
attaatccacagatgaatgaagaaatgctgtgccaagaatttggaagatttggaccatta
gctagtgtaaaaattatgtggcctagaactgatgaagaaagagcacgagaaagaaactgt
ggctttgtggcttttatgaacagaagagatgctgaaagagctctaaagaacttaaatgga
aaaatgattatgtcttttgaaatgaagttaggttggggtaaagctgtgcctattcctcca
catccaatatacattccgccttctatgatggaacacacgctccccccgcctccatccgga
ctgccttttaatgcgcagcctagagagcgattaaaaaaccccaatgctcccatgttacca
ccacctaaaaacaaggaggatttcgagaagactctgtcgcaagccatagtcaaagtggtt
atcccaacagaaaggaatttactcgccctgatacaccgaatgatagaatttgttgtacgt
gaagggccaatgtttgaagctatgattatgaacagagaaatcaacaatcctatgttcagg
ttcttatttgaaaaccagacaccagcccatgtttactacaggtggaagctttattctatt
ctgcagggagattctccaacgaaatggcggacagaagattttcgaatgttcaaaaatgga
tctttttggaggccaccacctttaaatccataccttcatgggatgtcagaggagcaagag
acagaagcgtttgtagaagagcctagtaagaagggagcactcaaggaagaacagcgggat
aagttagaagaaatcttgcgaggattaactccaaggaaaaatgatattggagatgccatg
gttttctgtcttaataatgctgaagctgctgaagaaatagtggattgcattactgagtcg
ctgtccatcttaaagacaccgcttcccaagaagattgccagattatatttggtttctgat
gttttatataactcttcagccaaagttgccaatgcttcatattataggaaattggaccta
ccatgcttgagcttgagtgcggatctggaactgagcgtggagggcagcagtcagccacgt
ctcccaggagggcctggtgctttgggaagactgagtagacggagtggctgtctaccacaa
gatgccaccagaggaggaaggccctatggaccccagtgtgaagtgtgtcattatgaagac
agtgccacttatgacacagtcctgtccagctgtgttcagcaacgggtaatgacctgcttc
agagcatgggaagattgggcaatttatccagaaccatttttgatcaaacttcagaatatt
ttcttaggacttgtaaatatcattgaagaaaaggaaacagaggatgtgccggatgatctt
gatggtgctcccattgaggaggagcttgatggggcgcctctggaggatgtggatgggatt
cccatcgatgccactcccatcgacgacctggacggggtccctataaagagtcttgatgat
gacctggatggagtgcctttggatgcaactgaagactcaaagaagaatgaacccatattt
aaagttgccccatcaaaatgggaggctgtagatgaatctgaattggaagcacaagcggta
acgacttctaagtgggagttatttgaccagcatgaagagtcagaagaagaggaaaaccaa
aatcaggaagaagagagtgaagatgaagaagacactcagagttccaaatctgaagaacat
catttgtattctaacccagtcagagaagagatgactgagtctaagttctctaagtactcc
gaaatgagtgaagaaaaacgagctaagcttcgtgagattgagctaaaagttatgaagttt
caagatgaattggaatctggaaagagacctaaaaaaccaggccaaagcttccaggaacaa
gtagagcactacagggataaactgttgcagcgggagaaggaaaaagaattagaaagagaa
cgagaaagagacaaaaaagataaagaaaaattggaatctcgatccaaagacaagaaggaa
aaggatgaatgtactccaacaagaaaagaaaggaagagacgacatagtacctctcccagc
ccttctcgaagtancagtggtcggcgtgtgaaatccccatcacccaaatcagagcgctcc
naacggtcagaaaggtctcacaaagaaagttctcggtccagatcctctcacaaagactct
cctagagacgctagcaaaaaagccaaaaggtcgccgtctggttcaaggacacctaaaagg
tctaggcggtctcgctctaggtcccctaagaaatcagggaagaaatccagatctcagtcc
cggtctccacacaggtctcataaaaagtcaaagaaaaacaaacactga
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