Mus caroli (Ryukyu mouse): 110302568
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Entry
110302568 CDS
T05910
Symbol
Trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110302568 (Trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110302568 (Trip12)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110302568 (Trip12)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
HECT type E3
110302568 (Trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
110302568
NCBI-ProteinID:
XP_021029054
Ensembl:
MGP_CAROLIEiJ_G0014339
UniProt:
A0A6P5QGY4
LinkDB
All DBs
Position
1:complement(77775011..77889481)
Genome browser
AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKRKGYIPPESRKSNFKAPKVQ
SNTTSELSRGHLSKRSCSSSSAIIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPRAFQHIESLSETNKPHSKSKKRHLDQEQQLKSAQLPSTSKAHTRKS
VAAGSSRNQKRKRTESSCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAIASASSTVPAGARVKQGKDQSKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPP
KACTNGSGSLGSTTPASSGTATAATNASADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEP
ARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVGREI
RLKRFLHVFFSSPLPGEEPVGRVEPVGHAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
AGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSVQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESTKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWHDGVCPSVANPLEVYLIPTPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQ
EGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVCRQFDSFRDG
FESVFPLCHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIDIMRDKLLIAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacacttagggcaggcaaaa
cgtaagggatatatccctcctgagagtagaaaatctaattttaaggcacccaaagtgcaa
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctatcatagttccacaaccagaggatccagacagagccaatacttcagaaaggcag
aaaacggggcaggtgcctaaaaaagacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgcgaaaaagcccagagcatttcagcatatt
gagtctctctcagaaaccaataagccacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatctgcacaattgccgtcaacaagcaaggctcacaccagaaagagt
gtggctgctggtagttcacggaatcagaaaagaaagaggacagagagttcttgtgttaag
agtggttctgggtccgaatcaactggtgccgaagagagatctgcaaaacccaccaagctg
gcttcaaaatcagccacctcagccaaagctgggtgtagcactatcaccgattcttcttct
gctgcctctacttcctcatcatcttcagctatagcctcggcctcttctactgtaccagca
ggtgccagggtgaaacaaggaaaagaccagagcaaggccaggcgttcccgttcagcgtcc
agccctagtcccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcctca
aaatttgattgggctgctcgcttcagccccaaagttagcctacctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagtttaagaaagtctaccaagaaacgcagtgagtccccacctgctgagctcccc
agtttgaggaggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaagagaggagcagctgaggcccggcggcaagagaaaatggcagac
cctgaaagcaaccaggagacagtaaattcctcagctgcccggacagatgaagctccccaa
ggagctgcagcctctagttctgttgcaggggctgttggcatgaccacctctggggagagt
gaatcggatgattctgagatgggacgattacaagctttgttagaggccaggggtcttcct
cctcacctatttggtcctctcgggcctcggatgtcacaacttttccatagaacaattgga
agcggagctagttctaaggcccagcagcttcttcaaggactacaagccagtgatgaaagt
caacagcttcaggcagtcattgaaatgtgtcagttattggtcatggggaatgaggagaca
ctaggagggtttcctgtgaagagtgttgttccagctttgataacattactgcagatggaa
cataattttgacattatgaatcatgcttgccgagccttaacatatatgatggaagctctc
cctcggtcatctgctgttgtagtagatgctatccctgttttcttagaaaagttgcaagtt
attcagtgcattgatgtggcagagcaggccttgactgccttggagatgttgtcacggcga
cacagtaaagccatcttacaagcgggtggtttggcagattgcttgttgtatctagaattc
ttcagcatcaatgcccaaagaaatgcactagcaattgcagccaattgctgccagagtatc
acaccagatgagtttcattttgtggcagattccctaccattgcttacccaaaggctaact
catcaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgtttagtggacaac
tttcaacatgaggagaacttactgcaacaggttgcttccaaagatctacttaccaatgtt
caacaattgttggtagtgactccaccgattttaagttctgggatgtttattatggtggtt
cgcatgttttctttgatgtgttccaactgtccaacattagctgttcaacttatgaaacaa
aacattgcagaaacacttcacttcctcctatgtggtgcctccaatggaagttgtcaagag
cagattgatcttgttccacgaagtcctcaagaactgtatgaactgacatctttgatttgt
gaacttatgccatgtttaccaaaagaaggcatcttcgcagttgataccatgttgaaaaag
ggaaatgcacagaacacagatggtgcaatatggcagtggcgggatgaccgaggcctctgg
catccctataacaggattgatagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaagacacgggaacagcacgtgccattcagagaaaacctaatcccttagcc
aatactaacactagtggatattcagagttaaagaaggatgatgctcgagcacagctaatg
aaagaagatccggaactggctaagtctttcattaagaccttgtttggtgttctctatgaa
gtgtacagctcctcagcaggccctgcggtcagacacaagtgccttagagcaattcttagg
ataatttattttgctgatgctgaacttctgaaggatgttctgaaaaatcatgctgtttca
agtcacattgcttcaatgctatccagccaagacctgaagatagtagttggagctcttcag
atggcagaaatcctaatgcaaaagttacctgatatttttagtgtttacttcaggagagaa
ggtgtgatgcatcaagtaaaacatttagcagaatcagagtctttgttgacaagtcccccc
aaagcatgtacaaatgggtcaggatccctgggatctacaacaccagccagcagtgggact
gcaacagcagcaaccaacgcctctgctgatctggggtcacctagcttgcagcatagcaga
gatgattctctggatctgagccctcaaggtcgattaagtgatgttctcaagagaaaacga
ctgccaaaacgagggccaagaaggccaaaatattcccctccaagagatgatgacaaagta
gacaatcaagctaaaagccctaccactactcagtcacctaaatcttccttcttggcaagc
ttgaatccaaaaacatggggaaggttaagtgcacagtccaacagcaacaatatcgaacca
gcacgaactgcaggagttagtggtcttgccagggcagcctcaaaagacaccatatccaat
aatagagaaaaaattaaaggctggattaaggagcaggcacataaatttgttgagcgttat
tttagttctgagaatatggatggaagcaaccctgccttgaatgtccttcagagactttgt
gctgcaactgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatc
cgtagcatagtctcagagtcagatgtgtcttcatttgaaatccaacatagtgggtttgtg
aaacaactcttgctgtatttgacatctaagagtgaaaaggatgctgtcggcagagagatc
cggttaaagcgtttccttcatgtatttttttcttctccacttcctggagaagagcctgtt
ggaagagtagaaccagtgggccatgcgcctttgctggcattggttcataagatgaacaac
tgtctcagccaaatggagcaatttccagtcaaagtacatgatttccctagtgggaacgga
gctggaggaagcttttctctcaacagaggatcacaagctttaaaatttttcaacacacat
cagttaaaatgtcagttacaacgacacccagattgtgcgaatgtgaagcagtggaaaggc
gggcctgtcaagattgatcccctggctctggtgcaagctattgagagataccttgtggtt
agaggatatggaagagtaagagaagatgatgaagatagtgatgatgatgggtcagatgaa
gaaatagatgagtctctggctgctcaatttttaaattcgggaaatgtcaggcacaggcta
cagttttatattggagaacatttactaccatataacatgaccgtgtatcaggcagtgcgg
cagttcagcgtacaggctgaagatgaaagagaatctactgatgatgagagcaatcctctg
ggaagagctggaatttggacaaagactcatacaatatggtacaaacctgtgagggaggat
gaagaaagtactaaagattgtgttggtggcaaaagggggagagcccaaacagctccaaca
aaaacttcccccagaaatgcaaagaagcatgatgagttatggcatgatggagtgtgcccg
tcagtagcaaatcctttagaagtttacctcattcccacaccacctgaaaatatcaccttt
gaagacccatccttagatgtaatacttcttttaagagttttacatgccatcagtcgatat
tggtattacttgtatgataatgcgatgtgcaaggagattattccaactagtgaatttatt
aacagtaaattaacagcaaaagcgaataggcagcttcaagatcctctagtaatcatgaca
ggaaacatcccaacatggctcactgagctaggaaaaacctgcccatttttctttcctttt
gatacccgacaaatgcttttttatgtaactgcatttgatcgggaccgggcaatgcaaaga
ttacttgataccaacccagagatcaaccagtctgattctcaagacagcagagttgcgcct
agattggatagaaaaaaacgtactgtgaacagagaggagctactgaaacaagctgagtct
gtgatgcaggaccttggcagctctcgggccatgttagaaatccaatatgaaaatgaggtt
ggtacaggtctggggccaacactggagttttatgcacttgtttctcaggaactacagaga
gctgacttgggtctctggagaggtgaagaagtgactcttagcaatccaaaaggaagccaa
gaagggaccaagtatattcaaaacctccagggcctgtttgcgcttccctttggtaggaca
gctaagccagctcacatcgcaaaggttaagatgaagtttcgcttcttaggaaaattaatg
gctaaggctatcatggatttcagattggtggaccttcctcttggcctgcccttttataag
tggatgctgcggcaggaaacttcattgacatctcatgatttatttgacattgatcctgtt
gtagccagatcagtatatcacctagaagacattgtcagacagaagaaaagactggagcag
gataaatcccagaccaaagaaagtctacaatatgcattggaaactcttacgatgaatggc
tgttcagtggaagatctgggattggattttacgctgcctgggtttcccaacattgaattg
aagaaaggagggaaggatattccagttactatccacaatttggaagagtacctaagattg
gtgatattctgggcactaaatgaaggtgtttgtcggcagtttgactcattcagagatgga
tttgaatcggtcttcccactctgccatcttcagtacttctacccagaagagctggaccag
ctcctgtgtggcagtaaagcagacacttgggatgcaaagacattgatggaatgctgcagg
cctgatcatggctatactcatgacagtcgggctgtgaagttcttgtttgagattctcagt
agttttgataatgagcagcagaggttgtttctccagtttgtgactggtagcccacggttg
ccagttggaggatttcggagtttaaatccacctctgacaattgtgcggaagacatttgaa
tcaacagaaaacccagatgacttcttaccatcagtaatgacttgtgtgaactatcttaag
ttaccggactactcaagcattgacataatgcgggacaaactcttgatagcagcaagagaa
ggccaacagtcgttccatctttcctga
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integrated database retrieval system
