Mus caroli (Ryukyu mouse): 110302609
Help
Entry
110302609 CDS
T05910
Symbol
Myo5a
Name
(RefSeq) unconventional myosin-Va isoform X4
KO
K10357
myosin V
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110302609 (Myo5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110302609 (Myo5a)
04131 Membrane trafficking [BR:
mcal04131
]
110302609 (Myo5a)
03029 Mitochondrial biogenesis [BR:
mcal03029
]
110302609 (Myo5a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110302609 (Myo5a)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
110302609 (Myo5a)
mRNA cycle factors
P-body specific factors
110302609 (Myo5a)
Membrane trafficking [BR:
mcal04131
]
Others
Actin-binding proteins
Myosins
110302609 (Myo5a)
Mitochondrial biogenesis [BR:
mcal03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
110302609 (Myo5a)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
110302609 (Myo5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
nSTAND3
NPHP3_N
MC7
Motif
Other DBs
NCBI-GeneID:
110302609
NCBI-ProteinID:
XP_021029068
Ensembl:
MGP_CAROLIEiJ_G0032437
UniProt:
A0A6P5QLL5
LinkDB
All DBs
Position
9:72090854..72245153
Genome browser
AA seq
1853 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEEGKDLEYRLDPKTGELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGNADSFHYTKQGGSPMIEGVD
DAKEMAHTRQACTLLGISESYQMGIFRILAGILHLGNVVFASRDSDSCTIPPKHEPLTIF
CDLMGVDYEEMCHWLCHRKLATATETYIKPISKLQATNARDALAKHIYAKLFNWIVDHVN
QALHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECKMPKGTDDTWAQKLYNTHLNKCALFEK
PRMSNKAFIIKHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PTSATSSGRTPLTRVPVKPTKGRPGQTAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
GDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAATTIQKYWRMYVVRRRYKIRRAA
TIVIQSYLRGYLTRNRYRKILCEHKAVIIQKRVRGWLARTRYKRTMKAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEGVYNSE
TEKLRNDVERLQLSEEEAKVATGRVLSLQEEIAKLRKDLERTRSEKKSIEERADKYKQET
DQLVSNLKEENTLLKQEKETLNHRIVEQAKEMTETMERKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMLNVPKPGHKRTDSTHSSNESEYTFSSEFAETEDIAPRT
EEPIEKKVPLDMSLFLKLQKRVTELEQEKQLMQDELDRKEEQVLRSKAKEEERPQIRGAA
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKDDKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNR
LLESQLQSQKRSHENEAEALRGEIQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEITR
LTNENLYFEELYADDPKKYQSYRISLYKRMIDLMEQLEKQDKTVRKLKKQLKVFAKKIGE
LEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLEYKREDEQKLVKNLILELKPRGVAV
NLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTINSIKKVLKKRGDDFETVSFWLSNTC
RFLHCLKQYSGEEGFMKHNTSRQNEHCLTNFDLAEYRQVLSDLAIQIYQQLVRVLENILQ
PMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILRQLNSFHSVMCQHGMDP
ELIKQVVKQMFYIVGAITLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKE
TLEPLIQAAQLLQVKKKTDDDAEAICSMCNALTTAQIVKVLNLYTPVNEFEERVSVSFIR
TIQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLALETIQIPASLGLGFIARV
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtccgagctctacaccaagtttgccagggtttggatccctgatcctgaggaa
gtgtggaaatcggcagagttgctcaaggattataagcctggagataaagtgctcctgctt
cacctcgaggaagggaaggatttggaataccgtctagatccaaagaccggtgagctccct
cacttacggaaccctgacatacttgttggagaaaatgacctcacagccctcagctatctt
cacgagcccgctgtgctacataatctccgagttcgcttcatcgattccaaacttatttat
acatattgtggaatagtcctggtagctataaatccctatgagcagctgcctatttatgga
gaagatattattaatgcctacagtggccagaacatgggtgacatggatcctcacatcttt
gcagtagctgaagaggcttataagcaaatggcaagggatgaacgaaatcaatccatcatt
gtaagtggagagtcaggcgcagggaagacggtctcggctaagtatgccatgcggtacttt
gcaactgtaagtggttctgccagcgaggccaatgttgaggaaaaggtcttggcctccaac
cccatcatggagtcaattggaaatgccaaaacaaccaggaatgataatagcagccggttt
ggaaaatatattgaaattggttttgacaagaggtacagaatcatcggtgccaatatgaga
acttaccttttagagaaatccagagtggtgttccaggcagaagaggagagaaactaccat
atcttctatcagctctgtgcttcggcaaagttacctgagtttaaaatgctgcggttagga
aatgcagatagttttcattacacaaagcaaggaggcagccctatgatagaaggagtagat
gatgcgaaggagatggcgcacaccaggcaggcctgcactctgctgggaattagtgaatct
taccaaatgggaatttttcgaatacttgctggcattcttcacttaggcaatgttgtattt
gcatctcgggattcagacagctgcacaatacctcccaagcatgaacctcttaccatcttc
tgtgaccttatgggtgtggattatgaagagatgtgtcactggctctgccaccgaaagctg
gctactgccacagagacatacatcaagcccatctccaagctgcaggccacaaatgcccga
gatgctttagcaaagcacatctatgcaaaactctttaactggattgttgaccacgtcaat
caggctctccattctgctgtcaagcagcactctttcataggcgtgctggacatctatgga
tttgaaacatttgagataaatagttttgaacagttctgcataaattatgcaaatgaaaaa
ctacagcaacaattcaacatgcatgtcttcaaattggaacaggaggaatatatgaaggaa
caaattccatggacacttatagatttctatgataatcagccttgtatcaatcttatagaa
tctaaactgggcattctcgatttgctggatgaggaatgtaagatgcctaaaggcacagat
gacacatgggcccaaaaactgtacaacacacatttgaacaaatgtgccctctttgagaag
ccccgcatgtcaaacaaagctttcatcatcaaacattttgctgacaaagtggagtaccag
tgtgaaggttttcttgaaaagaataaagatactgtttttgaagaacaaattaaagtcctt
aagtcaagcaagtttaagatgctaccagagctatttcaagatgatgagaaggccatcagt
cccacctctgccacctcctcagggcgcactcctctcactcgagttcctgtaaagcccacc
aagggccgacctggccagactgcgaaagagcacaagaagacagtgggacatcagtttcga
aactcccttcacctgcttatggaaacccttaacgccactactcctcactatgtacgctgt
attaagcctaatgatttcaagtttccattcacatttgatgagaagagggcagtgcagcag
ctaagagcatgtggtgtcctggagaccatccggatcagcgcagcagggtttccctcacgg
tggacttaccaagagtttttcagccggtaccgggtcctaatgaagcaaaaagatgtgctg
ggagatagaaagcaaacgtgcaagaatgtattagagaaactaatattggacaaggataaa
taccagtttggtaagacaaagatctttttccgtgctggtcaagtggcctatctagaaaaa
ttgagggctgacaaacttcgggctgcctgcatccggatccagaagaccattcgtgggtgg
cttctaaggaagagatacctgtgtatgcagagggcagccatcacagtgcagcgatacgtg
cggggctatcaggctcgatgctatgctaagtttctgcgcagaaccaaggcagcaaccacc
attcaaaagtactggcgtatgtatgtggtccgcaggaggtacaagattagacgagctgcc
acaattgttattcagtcttacttgagaggctacttgacaagaaataggtatcgcaagata
ctctgtgaacacaaagcagtcatcattcagaaacgtgtccgtggctggctggctcgtaca
cgttataagaggaccatgaaagccatcatctaccttcagtgctgcttccggcggatgatg
gccaagcgtgagctgaagaaactcaaaattgaggctcgctctgtggaacgctacaagaag
ctccatattggcatggagaacaagattatgcagctgcagcgcaaggtggatgagcagaat
aaagactacaaatgcctcatggagaaactgaccaatctggaaggagtatacaactctgag
actgaaaaactacgaaatgatgtagaacgtcttcagctaagcgaagaggaagctaaggtt
gccactgggcgggtccttagtctgcaggaagaaattgcaaaactccgaaaagacctggaa
cgaactcgatcagagaaaaagtctattgaagaaagagcagataaatacaaacaagaaact
gaccagctggtgtcaaacttgaaggaagaaaatactttgctgaagcaggaaaaggagacc
ctcaatcaccgcattgtggagcaggcgaaggagatgacagaaactatggagaggaagtta
gtagaagagacaaaacaactggagcttgacctgaatgatgagaggctgaggtatcagaac
cttctgaatgagttcagtcgcctagaggagcgctatgatgacctcaaggaagagatgacc
ctgatgctgaatgtgcctaagccaggacacaagagaacagactctacccacagcagcaat
gagtctgagtacaccttcagctctgagtttgcagaaactgaagacattgcaccaagaaca
gaggagccaattgagaagaaggtgcctctggatatgtcactattccttaagctccagaag
cgtgtcacagagctggaacaggagaagcagctgatgcaggatgagctggaccgcaaggag
gagcaggtgcttcgcagcaaggcaaaggaagaagaaagaccacagataagaggtgctgca
ctggagtatgagtctctcaagcgtcaagaactggagtcagaaaacaaaaaactgaaaaat
gagctgaatgagttgcgcaaagccctcagtgagaaaagtgccccagaagtgactgcgcca
ggtgcacctgcttaccgagtcctcatggaacagctgacctccgtgagcgaggagctcgat
gtccgcaaggaggaagtcctcatcttgaggtcgcagctggtgagccagaaagaagccatc
cagcccaaggatgacaagaatacaatgacagattccacaattcttttggaagatgtacag
aaaatgaaagacaaaggtgaaatagcacaagcatatattggtttgaaagaaacgaacagg
ctcttagaatcccagctacagtcgcagaaaagaagccatgagaatgaggctgaggccctg
cgtggggagatccagagcctaaaggaagaaaacaaccggcaacagcagctgctggcccag
aacctgcagctgccccctgaggcccgcattgaggccagcctgcagcatgagatcacccgg
ctgaccaatgagaacctgtattttgaggaattatatgcagatgaccctaagaagtatcaa
tcctatcggatttcactttacaaaaggatgattgatctgatggaacaacttgaaaagcag
gataaaactgtccggaaactgaagaaacaactgaaagtctttgccaaaaaaattggtgaa
ctagaagtggggcagatggagaacatatctccaggacagatcatcgatgagcctatccgg
ccagtcaacattccccggaaagaaaaggatttccaaggaatgctggagtacaaaagggag
gatgagcagaagctagtgaagaacctgattctagaactaaagccacgtggtgtggctgtc
aatctgattccaggattaccagcctatatcttgtttatgtgtgtacgacatgctgactat
ctgaacgatgatcagaaagtaagatcattgctgacatcaacaattaacagcatcaaaaaa
gtcttgaagaaaagaggtgacgattttgaaactgtctccttctggctctctaacacatgt
cgatttttgcactgtttgaagcaatatagtggagaggagggctttatgaagcacaacaca
tctcgccagaatgagcactgcctcaccaattttgaccttgctgaatatcggcaagtactg
agtgacttggccattcagatctatcagcagctcgtgagggtgttagagaacattcttcag
ccaatgatagtctcaggcatgctagagcatgaaacaattcagggcgtatctggggtgaag
cccacagggctcagaaagcgaacctccagtatcgcagatgagggcacctacacactggac
tccatcctgcggcagctcaactccttccactcagtcatgtgtcagcatggcatggacccg
gagctaatcaagcaggtagtcaaacagatgttctacattgtgggcgccatcaccctaaac
aacctcctcctgcgcaaggacatgtgctcctggagcaagggcatgcagatcaggtacaat
gtcagtcaactggaagaatggctacgtgacaagaatctaatgaacagtggggccaaggag
actctggaacctcttatccaggccgctcagcttttgcaagtgaaaaagaaaactgacgat
gacgcagaagccatctgctccatgtgcaacgccctgaccacggcccagattgtcaaagtg
ttgaacctgtacacaccggttaatgagtttgaagaaagggtctccgtttcatttatccgc
actatacagatgcggttacgagacaggaaagactctccacagctgctcatggatgcgaaa
cacatctttcctgtcacttttccctttaacccatcctccctggccctagaaaccatccag
atcccagccagcctgggcctgggcttcattgcacgggtctga
DBGET
integrated database retrieval system
