Mus caroli (Ryukyu mouse): 110302680
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Entry
110302680 CDS
T05910
Name
(RefSeq) LOW QUALITY PROTEIN: probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcal03009
]
110302680
Enzymes [BR:
mcal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
110302680
Ribosome biogenesis [BR:
mcal03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110302680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
PCMT
FtsJ
Methyltransf_25
FTA4
Ubie_methyltran
Methyltransf_15
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-GeneID:
110302680
NCBI-ProteinID:
XP_021029127
UniProt:
A0A6P5QFK1
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All DBs
Position
10:complement(50882693..50885034)
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AA seq
461 aa
AA seq
DB search
MGRKLDPTKKEKRGPGRKARKQKGAETELVRFLPAAGDENSKRLSSRARKRAAKRRAGSV
DVPKPNKSPGIKTLPGELSKGAVQARGKKRPAPIQNSDGDEEEDSGXEDDVVTQGDLWGS
DDSDEDMVDDYGAASNSEDEEEKLLPIERAALKQKTQDAAARVQWSEEDTDDEDDDDGVS
PETHPRKDDKAEGGLQINVEDEEAFVLPPAGETDQDGQAPDLQRVHKRIQDIVGVLRDFG
AQREEGRSRAEYLSRLQKDLATYYSYGDFLLSKFMELFPLSELIEFLEANEVPRPITLRT
NTLKTRRRDLAQALINRGVNLDPLGKWSKSGLVVYDSSVPIGATPEYLAGHYMLQGASSM
LPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANADRLKSVVGNLHRLGV
TNTIISHYDGRQFPKVVGGFDRVLLDAPYPDARLASPCAYK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagttggaccctacgaagaaggagaagcgtggacccggccgaaaggcccga
aaacagaagggtgcggagaccgaattggtcagatttttgcctgcagctggcgatgagaat
tccaagaggctgtcgagtcgtgcccgaaagcgggcagccaagaggagggcagggtctgtc
gacgtccctaagccaaataagtctcccgggatcaaaacattgcctggagagttatccaaa
ggagcagtccaggctcgaggtaaaaagcgcccagcaccaattcaaaacagtgatggggac
gaggaggaagactcggggnnggaagatgatgtggtgacccagggggacctttggggctct
gacgacagtgatgaagacatggtggatgactacggagctgcctctaattcagaggatgag
gaggaaaagctgttgcctattgaaagagctgccctgaagcagaaaacccaggacgccgca
gctcgggtccagtggagtgaagaggacactgatgatgaagatgatgatgatggtgtgtcc
cctgagacccaccccagaaaggatgacaaagcagaggggggcttgcagattaatgtggaa
gatgaggaagcctttgtgctgccccctgctggggagacggaccaggatggccaggctcca
gacctgcagcgagttcacaagcggatccaggacatcgtgggagtgctgcgggattttgga
gctcagcgagaagagggccggtcccgagctgagtatctaagtcggcttcagaaggacctg
gccacttactattcttatggagacttcctgttgagcaagttcatggagctgttccctctg
tctgagttgatcgagttcttagaagctaatgaggtgccccggccaatcacccttcggacc
aacaccttgaaaacccgtcgccgagaccttgctcaggctctgatcaatcgtggggttaat
ctggatccactggggaagtggtcaaagtctggacttgtggtatatgattcttcagtgcct
attggcgctacccccgagtacctcgctggacactatatgctgcagggagcttccagtatg
ttgcccgtcatggccctggcacctcaggagcatgagcggatcttagacatgtgctgtgct
cctggggggaagaccagctacatagctcagctgatgaagaacacaggagtgatccttgcc
aacgatgccaatgcagaccggctcaagagcgtggtgggcaacctgcaccgcttgggagtc
accaacaccatcatcagccactatgatgggcgccagttccccaaggtggtggggggcttt
gatcgagtgctactggacgctccttatcctgatgcaaggctggcctccccctgtgcatac
aaatga
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