Mus caroli (Ryukyu mouse): 110302686
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Entry
110302686 CDS
T05910
Name
(RefSeq) LOW QUALITY PROTEIN: E3 SUMO-protein ligase RanBP2-like
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal03250
Viral life cycle - HIV-1
mcal05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110302686
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110302686
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110302686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110302686
03110 Chaperones and folding catalysts [BR:
mcal03110
]
110302686
04121 Ubiquitin system [BR:
mcal04121
]
110302686
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110302686
Chaperones and folding catalysts [BR:
mcal03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
110302686
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110302686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
Zn_ribbon_RanBP
IR1-M
Pro_isomerase
WH1
TPR_1
TPR_2
TPR_14
TPR_8
ARM_TT21_C
TPR_16
ANC1_spectrin
TPR_CcmH_CycH
TPR_11
Motif
Other DBs
NCBI-GeneID:
110302686
NCBI-ProteinID:
XP_029338829
Ensembl:
MGP_CAROLIEiJ_G0015334
UniProt:
A0A6P7RGJ7
LinkDB
All DBs
Position
10:52995388..53045874
Genome browser
AA seq
3015 aa
AA seq
DB search
MRRSKADVERYIASVQGSAPSPREKSMKGFYFAKLYYEAKEYDLAKKYISTYINVQERDP
KAHRFLGLLYEVEENIDKAVECYKRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWVER
AAKLFPGSPAIYKLKEQLLDCKGEDGWNKLFDLIQSELYARPDDIHVNIRLVELYRSNKR
LKDAVAHCHEADRNTALHSNLEWNSCVVQTLKVGESCFSTFYSFDSALQSVKSSVGGNDE
LSATFLETKGHFYMHVGSLLLKMGEQSDIQWRALSELAALCYLVAFQVPRPKVKLIKGEA
GQNLLETMAHDRLSQSGHMLLNLSRGKQDFLKEVVESFANKSGQSALCDALFSNPSSKER
SFLGNDDIGNLDGQVPDPDDLARYDTGAVRAHNGSLQHLTWLGLQWNSLSTLPAIRKWLK
QLFHHLPQETSRLETNAPESICILDLEVFLLGVIYTSHLQLKEKCNSHHTSYQPLCLPLP
VCRQLCTERQKTWWDAVCTLIHRKALPGTSAKLRLLVQREINSLRGQEKHGLQPALLVHW
AQSLQKTGSSLNSFYDQREYIGRSVHYWRKVLPLLKMIRKKNSIPEPIDPLFKHFHSVDI
QASEIGEYEEDAHITFAILDAVNGNIEDAMTAFESIKNVVSYWNLALIFHRKAEDIENDA
LSPEEQEECKNYLRKTRDYLIRILDDSDSNTSVVQKLPVPLESVKEMLNSVMQELEDYSE
GGTLYKNGCWRSADSELKHSTPSPTKYSLSPSKSYKYSPKTPPRWAEDQNSLLKMICQQV
EAIKKEMQELKLSSNNSASPHRWPAEHYGQDPAPDGYQGPQTFHGAPLTVATTGPSVYYS
QSPAYNSQYLLRPAANVTPTKGPVYGMNRLPPQQHIYAYSQQMHTPPVQSSSACMFSQEM
YGPPLRFESPATGILSPRGDDYFNYNVQQTSTNPPLPEPGYFTKPPLVAHASRSAESKVI
EFGKSNFVQPMQGEVIRPPLTTPAHTTQPTPFKFNSNFKSNDGDFTFSSPQVVTQPPSTA
YSNSESLLGLLTSDKPLQGDGYSGLKPVSAQASGSRNTFSFGSKNTLTENMGPNQQKNFG
FRRSDDMFACHGPGKSVFTTAASEQANKSHETDGGSAHGDEEDDGPHFEPVVPLPDKIEV
KTGEEDEEEFFCNRAKLFRFDGESKEWKERGIGNVKILRHKTSGKIRLLMRREQVLKICA
NHYISPDMKLTPNAGSDRSFVWHALDYADELPKPEQLAIRFKTPEEAALFKCKFEEAQNI
LKALGTNSSTTPDHTLRTVKEPAAQENKDVCKADGGNLNFEFQIVKKEGPYWNCNSCSFK
NAATAKKCVSCQNTNPTSNKELLGPPLVENGFAPKTGLENAQDRFAIMTANKEGHWDCSV
CLVRNEPTVSRCIACQNTKSASSLVQTSFKFGQGDLPKSVDSDFRSVFSKKEGQWECSVC
LVRNEGSSKKCVACENPGKQFKEWHCSLCSAKNEAHAIKCVACNNPITPSLSTAPPSFKF
GTSEMSKPFRIGFEGMFAKKEGQWDCSLCFVRNEASATHCIACQYPNKQNPPTSCVSAPA
SSETSRSPNNGFEGLFTKKEGEWECAVCSVQNESSSLKCVACEASKPSLKPHXAHSAFTV
GSKSQSNESAGSQVGTEFKSNFPEKNFKVGISEKKFKFGHVDQEKTPCFAFQGGSNTEFK
SIKDGFSFCIPVSADGFKFGIQETGNQEKKSEKHLENDPSFQAQDTSGQKNGSGVVFGQT
SSTFTFADLAKSTSREGFQFGKKDPNFKGFSGAGEKLFSSQSGKVAEKANTSSDLEKDDD
AYKTEDSDDIHFEPVVQMPEKVELVTGEEDEKVLYSQRVKLFRFDAEISQWKERGLGNLK
ILKNEVNGKLRMLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWLASDFSDGDAKLEQ
LAAKFKTPELAEEFKQKFEECQRLLLDIPLQTPHKLVDTGRAAKLIQRAEEMKSGLKDFK
TFLTNDQVKVTDEEKASSGADVPSASDTTVKQNPDNAGPSLEWDNYDLREDALDDSVSSS
SVHASPLASSPVRKNLFRFGESTTGFNFSFKSALSPSKSPAKLNQSGASVGTDEESDITQ
EEERDGQYFEPVVPLPDLVEVSSGEENEQVVFSHRAKLYRYDKDVGQWKERGIGDIKILQ
NYDNKQVRIVMRRDQVLKLCANHRITPDMTLQTMKGTERVWVWTACDFADGERKIEHLAV
RFKLQDVADSFKKIFDEAKTAQEKDSLITPHVSHLSTPRESPCGKIAIAVLEETTRERTD
LTQGDEVIDTTSEAGETSGTSETTPKAVVSPPKFVFGSESVKSIFSSEKSKPFAFGNSSA
TGSLFGFSFNAPLKNSNSEMTSRAQSGSEGKVKPDKCELPQNSDIKQSSDGKVKNLSAFS
KENSSTSYTFKTPEKAQEKSKPEDLPSDNDILIVYELTPTPEQKALAEKLLLPATFFCYK
NRPGYVSEEEEDDEDYEMAVKKLNGKLYLDDSDKPLEENLADNDKECVIVWEKKPTVEER
AKADTLKLPPTFFCGVCSDTDEDNGNGEDFQSELRKVCEAQKSQNEKVTDRVGIEHIGET
EVANPVGCKSEEPDSDTKHSSSSPVSGTMDKPVDLSTRKETDMEFPSRGEDKTVLFGFGS
GTGLSFADLASSNSGDFAFGSKDKNFQWANTGAAVFGTQSTSKGGEDEDGSDDDVVHNED
IHFEPIVSLPEVEVKSGEEDEEVLFKERAKLYRWDRDVSQWKERGIGDIKILWHTMKNYY
RILMRRDQVFKVCANHVITKAMELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEM
TESFKKKFEECQQNIMKLQNGQTSLAAELSKDTNPVVFFDVCADGEPLGRIIMELFSNIV
PQTAENFRALCTGEKGFGFKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGAKFDDENFD
LKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPK
GSVSRRICITECGQL
NT seq
9048 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgtagcaaggccgacgtggagcggtacatcgcctcggtgcagggctccgccccg
tcgccccgagagaagtcaatgaaaggattctattttgcaaagctgtactatgaagctaaa
gaatatgatcttgctaaaaaatacatttctacgtatattaatgtgcaagagagagaccct
aaagcccacagatttttgggtcttctttatgaagtcgaagaaaatatagacaaagctgta
gaatgttataagcgttcagtggaattaaacccaacgcaaaaagatcttgtgttgaagatt
gcagaattgctttgtaaaaatgatgtgactgatggaagagcaaaatactgggttgaaaga
gcagccaaacttttcccaggaagtcctgccatttataagttaaaggaacaactgttagat
tgtaaaggtgaagatggatggaataaactttttgacttgattcagtcagaactttatgca
agacctgatgatattcatgtaaatatccgactagtagagctttatcgttcaaataaaaga
ttgaaggatgctgtggcccactgccatgaggcagacaggaacacagctttacattcaaat
ttagaatggaattcatgtgttgtacagactcttaaggtaggtgaaagctgtttctctaca
ttttacagttttgatagtgctcttcagtctgtgaagtcttctgtgggtggaaatgatgag
ctatcagctactttcctagaaacgaaaggacatttctacatgcatgttggctctctgctt
ttgaagatgggtgagcagagtgacattcagtggcgagctctttctgagctggctgcattg
tgctatcttgtagcatttcaggttccaagaccaaaggttaaattaataaaaggagaagct
ggacaaaatctactggaaacgatggcccatgatcgccttagccagtcagggcacatgttg
ttaaacttaagtcgtggcaagcaagactttctaaaggaagttgtggaatcttttgctaac
aaaagtggccagtctgctctctgtgatgctctgttttccaatccgtcatccaaggagaga
tcctttcttgggaatgatgatattggaaaccttgatggacaagtgccagaccctgatgac
ttggctagatatgatactggtgccgttcgagcacataatggtagtcttcagcaccttacc
tggcttggcttacaatggaattcactgtctactttaccagcaattcgaaaatggttaaaa
cagctcttccaccatttgcctcaggagacgtcaaggcttgaaacaaatgcacctgaatca
atatgtattttagatcttgaagtattcttacttggagttatatataccagtcacttacag
ttaaaggagaagtgtaattctcaccacacttcctatcaaccattgtgtttgccacttcct
gtgtgcagacagctttgtacagaaagacagaagacatggtgggatgcagtttgtactctg
attcacagaaaggccttacctggaacctcagcaaaattgcgacttctagttcaacgtgaa
ataaacagtctgagaggccaggaaaagcacggccttcaacctgctctgcttgtgcattgg
gcccagagtcttcaaaaaacaggcagcagtcttaattctttttatgatcaacgggaatac
ataggcagaagtgttcattattggaggaaagttttaccattgttgaagatgatcagaaag
aagaatagtattcctgaacctattgatcctctgtttaaacatttccatagtgtggatatt
caggcatctgaaattggtgaatatgaagaagatgcacacataacttttgctatattggat
gctgttaatggaaatatagaagatgctatgactgcttttgaatctattaaaaatgtagtt
tcttattggaatcttgcactgatttttcacaggaaagcagaagacattgaaaatgatgcc
ttgtctcctgaagaacaagaagaatgcaaaaattatctgagaaagactagggactacctg
ataaggattttagatgatagtgattcaaatacttctgtggttcagaaattgcctgttcct
cttgagtctgtaaaagagatgctgaactcagttatgcaggaacttgaagactacagtgaa
ggaggtactctctataaaaatggttgctggcgaagtgctgactcagagttgaagcattca
acaccatctcctaccaaatattctctatcaccaagtaaaagttacaagtattctccaaaa
acaccacctcgatgggcagaagatcaaaattctttactgaaaatgatctgccagcaagta
gaggccattaagaaagaaatgcaggaattgaagctaagtagcaataactcggcatcgcct
caccgctggccagcagagcattacggacaagacccagctcctgatgggtatcaggggcca
caaacgtttcatggggctcctctaacagttgcaactactggcccatcagtatattatagt
cagtcacctgcatataactcccagtatcttctcagaccagctgctaatgtaactcccaca
aagggtccagtttatggcatgaataggcttccaccccaacaacatatttatgcatattca
caacagatgcacacaccaccagtgcaaagttcatctgcttgtatgttctctcaggagatg
tatggtcctcccttgcgttttgagtctcctgcaacaggaattctatcacccaggggtgat
gattattttaattacaatgttcaacagacaagcacaaatccacctttgccagaaccaggg
tatttcacaaagcctccacttgtagctcacgcttcaaggtcagcagaatcaaaggttata
gaatttggaaaatccaatttcgttcagcccatgcagggtgaagtaataaggccacctttg
acaacaccagcacatacaacacagccaactccctttaaatttaactcaaatttcaaatca
aatgatggcgacttcacattttcatcaccacaggtagtgacacagcctccttcaacagct
tatagtaacagtgagagtcttctaggccttctgacttcagataagcctttacaaggagat
ggctacagtggactaaagccagtatctgctcaagctagtgggtctcggaatacattcagt
tttggaagcaaaaatacacttacagaaaacatgggcccaaatcagcagaagaattttggt
tttcgtcgcagtgatgacatgtttgcttgtcacggcccagggaagtctgtatttacaaca
gctgcttcagagcaggcaaataaaagtcatgagacagatggaggaagtgctcatggggat
gaggaggatgatggccctcactttgagcctgtggtacctcttcctgacaagatagaagta
aaaactggcgaggaagatgaagaagaattcttttgcaatcgtgcaaagttgttccgtttt
gatggtgaatccaaagaatggaaggaacgtgggataggcaatgtaaaaatactaaggcat
aagacatctggtaaaattcgccttctgatgagacgagagcaagtattaaagatctgtgca
aatcattacataagcccagatatgaaactgacaccaaatgctggctcagatagatctttt
gtatggcatgcccttgattatgcagatgaattgccaaaaccagaacagcttgcaattaga
ttcaaaactcctgaggaagcagcactctttaagtgtaaatttgaagaggcccagaacatt
ttaaaagccttaggaacaaactcatctacaacaccagatcacactctgagaactgtaaag
gagcctgcagctcaggagaacaaggatgtttgcaaagctgatggtggaaacttgaatttt
gaattccagattgtaaagaaggaagggccttactggaattgtaacagctgctcctttaag
aatgctgcaactgctaagaaatgtgtatcatgccagaatacaaacccaaccagtaacaaa
gagctcctaggtcctccgttagttgaaaatggctttgctcctaaaactggcctggaaaat
gctcaagatcgatttgcaataatgactgcaaataaagaaggccattgggactgcagtgtt
tgtttagtaagaaatgaacccactgtttctaggtgcattgcatgtcagaacacaaagtct
gcctcttcgcttgttcaaacttctttcaaatttggtcagggagatcttcctaagtctgtt
gacagtgatttcagatctgttttttcaaaaaaagaaggtcagtgggaatgcagtgtatgc
ctagtcagaaatgaaggaagctctaaaaaatgtgttgcttgtgagaacccaggaaaacag
ttcaaagaatggcattgtagtttgtgctcggcgaaaaatgaagcacatgctataaagtgt
gttgcttgtaataatcctattacaccaagtttatctactgcacctccctcttttaagttt
ggtacctcagagatgagtaagcctttcaggattggatttgagggtatgttcgccaagaaa
gaaggacagtgggattgtagcttgtgttttgtccgaaatgaagccagtgctactcactgt
attgcttgtcagtatccaaataaacagaatccgcctacatcttgtgtgtcagctcctgcc
tcttcagagacaagcaggtctccaaacaatggatttgaaggcttattcaccaaaaaggaa
ggagaatgggagtgtgctgtttgttctgtacaaaatgagagctcttccctaaaatgtgtg
gcttgtgaagcctccaagccatctcttaagccacattaagctcattcagcttttacagtg
ggctcaaagtcacagtcaaatgaatctgcaggaagtcaagtgggaacagaattcaaaagt
aactttcctgagaagaattttaaagttggcatttcagagaagaaatttaaatttgggcat
gtggatcaagaaaaaacaccttgctttgcctttcagggtggctctaatacagaatttaag
tcaatcaaggatggatttagtttttgcattcctgtatctgctgatgggtttaaatttggc
attcaggaaacgggaaatcaagagaaaaagagtgaaaaacatcttgaaaatgaccctagt
ttccaagctcaggatactagtggtcagaagaatggtagtggtgtggtctttggtcagaca
agcagcaccttcacctttgcagatcttgcaaagtcaacatcaagagaagggtttcaattt
ggcaagaaagaccctaattttaagggattttcaggtgcaggagaaaaattattctcatca
caaagtggcaaagtggctgagaaggcaaatacctcttctgatcttgagaaagatgatgat
gcatataagactgaggacagtgatgacatccattttgagccagtagtgcagatgccagaa
aaggtggaactagtaacaggagaagaagatgaaaaagttttgtattcacaaagggtgaaa
ttatttagatttgatgctgagataagtcagtggaaagaaaggggtttggggaatttaaaa
attctcaaaaatgaagtcaatggtaaactgagaatgctgatgcgaagagaacaagtgcta
aaagtttgtgccaatcattggataaccactacaatgaacctgaagcctctctcagggtca
gatagagcatggatgtggctagctagtgatttctccgatggtgacgcaaaactggaacaa
ctggctgcaaagtttaaaacaccagagctagctgaagaattcaagcagaaatttgaggag
tgtcaacgtcttctcttagacattccacttcagacaccccataaacttgtagatactggc
agggctgctaaattaatacagagagctgaggaaatgaagagcggactgaaagatttcaaa
acgtttttgacaaatgatcaagtaaaggtaactgatgaggagaaggcaagttcaggtgca
gatgttcccagtgcttccgacactacagtcaagcagaatcctgacaacgccgggccttcc
ttagaatgggataactatgacttacgggaagacgccttggatgacagtgtcagcagcagc
tcagttcatgcttctccattggcaagcagccctgtgcggaaaaacctcttccgctttggt
gagtcaactacaggatttaacttcagttttaaatctgctctgagtccatctaagtctcca
gccaaattgaaccagagtggagcttcagttggcactgatgaggagtctgatattactcaa
gaagaagagagagatggacagtactttgaacctgttgttcctttacctgatctagttgaa
gtatccagtggtgaggaaaatgaacaagttgtttttagtcacagagcaaaactttacaga
tacgataaagatgttggccagtggaaagaaagaggcattggagatataaagatcttacag
aattatgataataaacaagttcgcatcgtgatgagaagggaccaggtattaaaactttgt
gccaatcacagaataactccagatatgactttgcaaactatgaaagggactgaaagagtg
tgggtgtggactgcatgtgattttgcagatggagaaagaaaaatagaacatttggctgtt
cgttttaaactacaggatgttgcagactcatttaagaaaatttttgatgaagcaaaaaca
gcccaagaaaaagattcgttgataacacctcatgtttctcatctgagcacccctagagag
tcaccatgtggcaaaattgctattgctgttttagaagaaactacaagagaaaggacagat
ttaactcagggagatgaagtaatagatacaacttcagaagctggagaaacatctggcaca
tcggaaacaacaccaaaagcagtagtttctcctcctaagtttgtatttggctcagaatct
gttaagagcatttttagtagtgaaaaatccaagccatttgcatttggcaacagttcagcc
actggttctctgtttggatttagttttaatgcacctttgaaaaatagcaatagtgaaatg
acttccagagctcagagtggatctgaaggaaaagtaaaacctgacaaatgtgagctgcca
cagaactctgacatcaagcaatcttctgatggcaaagtcaaaaatctcagtgccttttcc
aaagagaactcttcaactagttatacatttaaaacaccagaaaaggcacaagagaagagt
aaacctgaagatctcccctcagataacgatattctcattgtgtatgaactcactcccact
cctgagcagaaagccctggcagagaaacttctgcttcctgcaactttcttttgttataag
aatagacctggctatgttagtgaagaagaggaggatgatgaagattatgaaatggctgtc
aagaagcttaatggaaaactctatctagatgactcagataaaccattggaagaaaatcta
gcagataatgacaaggaatgtgttattgtttgggaaaagaagccaacagttgaagagaga
gcaaaagcagatactttaaagcttccacctacatttttctgtggagtctgcagtgatact
gatgaggacaatggaaatggggaggattttcagtcagagcttcgcaaagtctgtgaagct
cagaaatcccagaatgagaaagtgactgatagagttggtattgagcatataggtgagact
gaagtagcaaaccctgttggctgtaagtctgaagaacctgattctgataccaaacatagt
agctcatcccctgtttctgggactatggacaaacctgtagatttgtccactagaaaagaa
actgacatggaattcccaagcagaggagaagacaagactgttttgtttggatttggaagt
ggtacaggcctgtcatttgcagacttggcttcaagtaattctggagattttgcttttggc
tctaaagataaaaatttccagtgggcaaatactggagcagctgtgtttggaacacagtca
acaagtaaaggtggcgaggatgaagacggcagtgatgacgatgtagttcataacgaggac
atccactttgaacctatagtctccttaccagaggtagaagtgaaatctggagaggaagat
gaagaagttttgttcaaagagagagccaaactttataggtgggatagagatgtcagtcag
tggaaggagagaggtattggagatataaagattctctggcatacaatgaagaattattat
cggatcctaatgagaagagaccaggtttttaaagtgtgtgcaaaccatgttattaccaaa
gccatggagttaaaacctttaaatgtttcaaacaatgctttagtctggactgcctcagat
tatgctgatggagaagcaaaagtagaacagcttgccgtgagatttaagacaaaggaaatg
actgagagttttaagaaaaaatttgaagaatgtcaacaaaatataatgaaactccagaat
ggacaaacatcccttgcagcagaattatcgaaggacaccaatcctgtggtgttctttgat
gtttgtgcggatggtgaacctctaggacggataatcatggaattattttcaaatatcgtt
cctcaaactgctgagaacttcagagcattatgcactggagagaagggctttggttttaag
aactccatttttcaccgagtagttccagattttatttgccaagggggagatattaccaaa
tacaatggaacaggtggacagtccatttatggagctaaatttgacgatgaaaactttgat
ttgaaacacactggtcctggcttactatccatggccaattacggccagaataccaacagt
tctcaattttttataacactgaagaaagcagaacatttggactttaagcatgtagtattt
gggtttgttaaggatggcatggatactgtgagaaagattgaatcatttggttctcccaaa
gggtctgttagtagaagaatttgtatcacagaatgtggacagctataa
DBGET
integrated database retrieval system
