Mus caroli (Ryukyu mouse): 110302819
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Entry
110302819 CDS
T05910
Symbol
Hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03018
RNA degradation
mcal04940
Type I diabetes mellitus
mcal05134
Legionellosis
mcal05152
Tuberculosis
mcal05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110302819 (Hspd1)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
110302819 (Hspd1)
05152 Tuberculosis
110302819 (Hspd1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
110302819 (Hspd1)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
110302819 (Hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110302819 (Hspd1)
03110 Chaperones and folding catalysts [BR:
mcal03110
]
110302819 (Hspd1)
03029 Mitochondrial biogenesis [BR:
mcal03029
]
110302819 (Hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110302819 (Hspd1)
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
110302819 (Hspd1)
Messenger RNA biogenesis [BR:
mcal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
110302819 (Hspd1)
Chaperones and folding catalysts [BR:
mcal03110
]
Heat shock proteins
HSP60 / Chaperonin
110302819 (Hspd1)
Mitochondrial biogenesis [BR:
mcal03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
110302819 (Hspd1)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110302819 (Hspd1)
Exosomal proteins of other body fluids (saliva and urine)
110302819 (Hspd1)
Exosomal proteins of breast cancer cells
110302819 (Hspd1)
Exosomal proteins of colorectal cancer cells
110302819 (Hspd1)
Exosomal proteins of bladder cancer cells
110302819 (Hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
110302819
NCBI-ProteinID:
XP_021029220
Ensembl:
MGP_CAROLIEiJ_G0014143
UniProt:
A0A6P5Q938
LinkDB
All DBs
Position
1:complement(48980612..48991308)
Genome browser
AA seq
573 aa
AA seq
DB search
MLRLPTVLRQMRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RSIAKEGFEKISKGANPVEIRRGVMLAVDAVIAELKKQSKPVTTPEEIAQVATISANGDK
DIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQ
DAYVLLSEKKISSVQSIVPALEIANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVFGEEGLNLNLEDVQAHDLGKVGEVIVTKDDAMLLKG
KGDKAHIEKRIQEITEQLDITTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVLGGGCALLRCIPALDSLKPANEDQKIGIEIIKRALKIPAMTIA
KNAGVEGSLIVEKILQSSSEVGYDAMLGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLT
TAEAVVTEIPKEEKDPGMGAMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgactacccacagtccttcgccagatgagaccagtgtcccgggcactggctcct
catctcactcgggcctatgccaaagatgtaaaatttggtgcggatgctcgagccttaatg
cttcaaggtgtagaccttttagccgatgctgtagctgttacaatggggccaaagggaaga
actgtgattattgaacagagttggggaagtcccaaagtcacaaaagatggggtcactgtt
gcaaagtcaattgatttaaaggataaatacaaaaatattggagctaaacttgttcaggat
gttgccaataacacaaacgaagaggctggggatggcaccaccactgccactgttctggca
cgatctattgccaaggagggctttgagaagatcagcaaaggagctaatccagtggaaatc
cggagaggtgtgatgttggctgttgatgctgtaattgctgaacttaagaaacagtctaaa
cctgtgacaacccctgaagaaattgctcaggttgctacaatttctgcaaatggagacaaa
gacattgggaacatcatttctgatgcaatgaaaaaggttggaagaaagggtgtcatcaca
gtgaaggatggaaaaaccctgaatgatgagctagaaattattgaaggcatgaagtttgat
agaggatatatttccccgtattttattaacacatcaaaaggtcaaaagtgtgaattccaa
gatgcctatgtcttgttgagtgaaaagaaaatttccagtgttcagtccattgtccctgct
cttgaaattgctaatgctcatcggaagccattggtcataatcgccgaagacgttgacgga
gaagctctaagcacgctggttttgaacaggctaaaagttggtcttcaggttgtagcagtc
aaagctccaggatttggggacaataggaagaaccagcttaaagatatggctattgctact
ggtggtgcggtgtttggagaagaggggttgaatctaaatcttgaagatgttcaagctcat
gacttaggaaaagttggagaggtcattgtcaccaaagatgatgccatgcttttgaaagga
aaaggtgacaaagctcacattgaaaaacgtattcaagaaatcactgagcagctagacatc
acaactagtgaatatgaaaaggaaaagctgaacgagcgacttgctaagctttcagatgga
gtagctgtgttgaaggttggaggaacaagtgatgttgaagtgaatgagaaaaaagacaga
gttactgacgctctcaatgctacaagagcagctgttgaagaaggcattgttctaggaggg
ggctgtgctctgcttcggtgcatcccagccttggattcattaaagcctgctaatgaagac
cagaaaataggtatagaaattattaaaagagcacttaaaattcctgcaatgacgattgct
aagaatgcaggtgttgaaggatctttgatagttgagaaaattctgcagagttcctcagaa
gttggttatgacgccatgcttggagattttgtgaacatggtggaaaaagggatcattgat
ccaacaaaggttgtaagaactgccttactggatgctgctggggtggcctccttgctaact
acagccgaagctgtagtgacagaaattcctaaagaagagaaggaccctggaatgggagca
atgggtggaatgggagggggtatgggaggtggcatgttctaa
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