Mus caroli (Ryukyu mouse): 110302849
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Entry
110302849 CDS
T05910
Symbol
Herc4
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110302849 (Herc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110302849 (Herc4)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110302849 (Herc4)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
HECT type E3
110302849 (Herc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
SCP_3
Motif
Other DBs
NCBI-GeneID:
110302849
NCBI-ProteinID:
XP_021029265
Ensembl:
MGP_CAROLIEiJ_G0015400
UniProt:
A0A6P5QHE8
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All DBs
Position
10:57723201..57797494
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AA seq
1057 aa
AA seq
DB search
MLCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGC
NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG
SEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCEKQTS
PQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLR
SQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVA
CGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPQDIGSED
YFCVKRIFSGGDQSFSHYSSPQNCGPPDDFRCSDPSKQIWTVNEALIQKWLSYPSGRFPV
EIANEIDGTFSSSGCLNGSFLAVSNDDHYRTGTRFSGVDMNAARLLFHKLIQPDHPQISQ
QVAASLEKNLIPKLTSSLPDVEALRFYLTLPECPLMSDCNNFTTIAIPFGTALVNLEKAP
LKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTALKVLEIL
HRVNEKTGHLIQYDKFYIHEVQELIDIRNDYINWVQQQAYGVDVSHGVTELADIPVTICT
YPFVFDAQAKTTLLQTDAVLQMQMAIDQAHRQNVSSLFLPVIESVNPCLILVVRRENIVG
DAMEVLRKTKNIDYKKPLKVIFVGEDAVDAGGVRKEFFLLIMRELLDPKYGMFRYYEDSR
LIWFSDKTFEDSDLFHLIGVICGLAIYNFTIVDLHFPLALYKKLLKRKPSLDDLKELMPA
VGRSMQQLLDYPEDDIEETFCLNFTITVENFGATEVKELVLNGADTAVNRQNRQEFVDAY
VDYIFNKSVASLFDAFHAGFHKVCGGKVLLLFQPNELQAMVIGNTNYDWKELEKNTEYKG
EYWADHPTIKIFWEVFHELPLEKKKQFLLFLTGSDRIPILGMKSLKLVIQPTGGGESYLP
VSHTCFNLLDLPKYTEKETLRCKLIQAIDHNEGFSLI
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctggggaaatgcatcctatggacaactaggtttgggaggaattgatgaagaa
attgtactcgagcccagaaaaagtgactttttcgtgaataaaaaggtccgagatgtaggc
tgtggactcaggcatactgtgtttgtcctggatgacgggactgtgtacacatgtggatgt
aatgatctaggacagctaggtcatgaaaagtccagaaagaaaccagagcaggttgttgcc
ctggatgcccagaatatcgtagctgttgcgtgtggagaagcccacacattagcactgaat
gacaagggccaggtgtacgcttggggcctcgactctgatggacagcttggcctacaggga
tcagaggaatgtatcagagtacccagaaatattaaaagtctttcggatatccagatagtg
caggttgcgtgcggttactatcattcacttgcactttctaaagcaagtgaagttttctgt
tggggacagaataagtatggccagctgggtctaggcattgactgtgagaagcagacttcg
ccgcagctgattaagtctttgcttggcataccattcatgcaggtcgcagcaggaggagcc
catagttttgtactcaccctttctggagctatctttggatggggacgtaacaaatttggt
cagctaggtcttaacgatgaaaatgataggtatgttcctaatttactaaagtcactaaga
tctcagaaaatagtttatatttgttgcggagaagatcatactgctgcattaaccaaggaa
ggtggagtgtttacctttggagctgggggctatggccagctgggtcataattctaccagt
catgagataaatcccaggaaagtttttgaactcatgggaagcattgttactcaggtcgct
tgtggaaggcagcatacctctgcatttgttccttcttcaggacgaatttactccttcggt
cttggtggtaatgggcagttgggaactggttcaaccagcaacagaaaaagccctttcact
gtaaaaggaaactggtttccttataatggacagtgtccacaagatattggttctgaagac
tatttctgtgtcaaaagaattttctcgggtggagatcaaagcttttcacattactctagt
ccgcagaactgtggacctccagatgactttagatgctctgacccttcaaagcagatctgg
acagtgaatgaagctctgattcagaaatggctcagctacccctctggaaggttccctgtg
gagatagccaatgagatagatggaacattttcttcgtctggctgcctaaatggaagtttt
ctggctgttagcaatgacgatcactatagaacaggcaccagattttcaggggttgacatg
aacgctgctagactcttattccacaaacttatacaacccgatcatcctcagatatctcag
caggtggcagctagtttggaaaagaatctaatccctaaactgactagttccctacctgat
gttgaagctctgaggttttatcttaccctgccagagtgtcccttgatgagtgactgcaac
aatttcacaacaatagcaatcccctttggtacagctcttgtgaacctagaaaaggcacca
ctgaaagtacttgaaaactggtggtcagtacttgaacctccactattcctcaagatagta
gaactttttaaggaagttgtggtacatcttttgaaactctacaagatcggcattccccct
tctgaaagaagaattttcaacagttttcttcataccgcattaaaggttttagaaatattg
catagggtaaatgagaaaacaggacatcttatccaatacgacaagttttacatccatgaa
gtccaagagctgatagacataaggaatgactatatcaactgggtccagcagcaagcctat
ggagtggatgtcagccatggagtaactgagttggcagacatcccggtgacaatttgtaca
tacccatttgtatttgatgcccaggcaaagaccactctgctgcagacagacgcagtcttg
cagatgcagatggccattgaccaggcccacaggcagaatgtctcctctctctttctccca
gtgatcgagtctgtgaatccttgcttaattctagttgttcgcagagagaatattgtagga
gatgccatggaagtcctcaggaaaaccaagaatatagattataaaaagccactcaaggtt
atatttgttggagaagatgctgttgatgcaggaggtgttcgcaaagaatttttcttgctt
atcatgagggaattgttggatcctaaatacggcatgtttcgatattatgaagattccagg
ctcatttggttttcagataagacatttgaagacagtgatttgttccacttaatcggtgtt
atctgtggattagcaatttataattttaccattgtggacctccattttcctttggcttta
tataagaaactgctgaaaaggaagccatccctggatgatctgaaagagctgatgccagcc
gtcgggagaagcatgcagcaattgctggactatccagaagatgacatagaggaaacattt
tgtctaaactttacgatcacagttgagaacttcggtgcaacagaagtaaaagagctggtt
ctgaacggcgcagacactgctgttaacagacagaatcggcaggagtttgttgatgcctat
gtggattacatattcaataaatcagtggcatctttatttgatgctttccatgcgggcttt
cataaggtctgtggaggaaaagttcttctgctcttccagcctaatgaattacaagctatg
gttattgggaatacaaattatgattggaaagaactggagaagaatacagaatacaaagga
gagtattgggcagaccatcccacgataaaaattttttgggaagtgtttcatgaattacca
ctagagaagaagaaacaatttctattatttttgacaggtagtgatcgaattcccattctt
ggtatgaagagtctgaaactagtcatccagccaacaggaggcggtgagagctatctcccg
gtttcccatacctgttttaatcttctagatctcccaaaatatacagagaaagaaaccctc
cgatgtaaactgatccaagctattgatcacaatgaaggcttcagtttaatatga
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