Mus caroli (Ryukyu mouse): 110302962
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Entry
110302962 CDS
T05910
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03440
Homologous recombination
mcal04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110302962
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110302962
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110302962
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110302962
03036 Chromosome and associated proteins [BR:
mcal03036
]
110302962
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110302962
Peptidases and inhibitors [BR:
mcal01002
]
Metallo peptidases
Family M67
110302962
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
110302962
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
110302962
BRISC complex
110302962
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
110302962
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
110302962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
110302962
NCBI-ProteinID:
XP_021029476
UniProt:
A0A6P5Q9L9
LinkDB
All DBs
Position
10:complement(101687955..101689337)
Genome browser
AA seq
291 aa
AA seq
DB search
MAVRMMQGVQAVYLESDAFLVCLNHALSTEKEEVMGLCIGQLNDHGRSDSRLAYTGAEMC
TVAKKMEAIRIVHIHSVIILRRSDKTKDRVEISPEQLSAASIEAERLAEQTGRPMRVVGW
YHSHPHITVWPSHVDVRTQAMYQMMDQSFVGLIFACFIEDKPTKIGRVLYTCFQSVQASK
SSEYERLEIPIHIVPRTTIGTVCLRSTVELPGILCQEEQEAYRRIHGLTHLDSVTKIHNG
SVFTKHLCSQMSAVCGPLLQWLEDRLEQNQQRLQELQQEKEDLMEELTSLE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggatgatgcagggagtacaggcagtttaccttgaatcggacgctttcctg
gtttgtctcaatcacgctctgagcacagagaaggaggaggtcatgggtctgtgtataggg
cagttgaatgatcacgggaggagtgactccaggcttgcatacactggagctgagatgtgc
acagttgcgaaaaagatggaggccatcagaattgttcacattcattctgttattatcttg
cgacgttctgacaagacaaaggaccgggtagaaatatctccggagcaactgtctgcagcc
tcgatagaggcagaacggttagcagagcaaacgggtcgtcccatgagagttgtgggctgg
taccattcccaccctcatataaccgtttggccttctcatgtcgacgtgcgtacacaggcc
atgtaccagatgatggatcagagctttgtaggactgatctttgcttgcttcatagaagac
aaacccacaaagataggccgtgtactctatacttgcttccagtctgtacaagcatcgaag
agttcagaatatgagagacttgaaatcccaatccatattgtacctcgtaccaccatcggg
acagtatgcctcaggtcaaccgtagagctgccggggatcctatgtcaggaagaacaagag
gcatatagaaggattcacggccttacacatctggactcagtaactaagatccataatggc
tctgtattcaccaagcatctgtgcagtcagatgtccgcggtctgtgggcctctcctacag
tggttggaggacagactagagcaaaaccagcagcgtttgcaggagttgcaacaagaaaag
gaagaccttatggaagagctgacttccctagaataa
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