Mus caroli (Ryukyu mouse): 110302965
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Entry
110302965 CDS
T05910
Symbol
Shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00260
Glycine, serine and threonine metabolism
mcal00630
Glyoxylate and dicarboxylate metabolism
mcal00670
One carbon pool by folate
mcal01100
Metabolic pathways
mcal01200
Carbon metabolism
mcal01230
Biosynthesis of amino acids
mcal01240
Biosynthesis of cofactors
mcal01523
Antifolate resistance
mcal04981
Folate transport and metabolism
Module
mcal_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
110302965 (Shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
110302965 (Shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
110302965 (Shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
110302965 (Shmt2)
09160 Human Diseases
09176 Drug resistance: antineoplastic
01523 Antifolate resistance
110302965 (Shmt2)
Enzymes [BR:
mcal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
110302965 (Shmt2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
110302965
NCBI-ProteinID:
XP_021029480
Ensembl:
MGP_CAROLIEiJ_G0015899
UniProt:
A0A6P5QGG9
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All DBs
Position
10:complement(119871903..119877054)
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AA seq
504 aa
AA seq
DB search
MVSFSLLRTTRPLQRCGQLVCMAARAQHSKVAQTQAGEAAGGWTGQESLSDSDPEMWELL
QREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQ
RRALEAFDLDPAQWGVNVQPYSGSPANLAAYTALLQPHDRIMGLDLPDGGHLTHGYMSDV
KRISATSIFFESMPYKLNPQTGLIDYDQLALTARLFRPRLIIAGTSAYARLIDYARMREV
CDEVRAHLLADMAHISGLVAAKVIPSPFKYADVVTTTTHKTLRGARSGLIFYRKGVRTVD
PKTGKEIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLRNAQA
MADALLKRGYSLVSGGTDTHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAIT
PGGLRLGAPALTSRQFREDDFRRVVDFIDEGVNIGLEVKRKTAKLQDFKSFLLKDPETSQ
RLANLRQQVEQFARGFPMPGFDER
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtatccttctctttgcttcggaccactcggcctctgcagagatgtggtcagctggtc
tgcatggctgcccgggcccagcacagcaaggtggcccagacgcaggctggggaggcagct
ggaggctggacgggccaggagagtttatcagacagtgaccctgagatgtgggagcttctg
cagagggagaaggacagacaatgtcgcggcctggagctcatcgcctcagagaacttctgc
agccgagctgcgctggaggccctggggtcctgtctcaacaacaagtactcggagggttac
cctggcaagagatactatggaggagcggaagtggtggatgagatcgagctgctctgccag
cgccgggccttggaagcctttgacctggatcccgcacagtggggagtcaatgtgcagcca
tactcagggtccccagccaacctggctgcctatacggcccttctgcagcctcatgataga
atcatggggttggacctgcccgatgggggccatctcacccatggctacatgtctgatgtc
aagcggatctctgccacatccattttcttcgagtctatgccctataagctcaatccccaa
actggcctcatcgactacgaccagctggcactgaccgctcggcttttccgaccgcggctc
atcatagctggcacgagtgcctatgcccgcctcattgactatgcacgcatgagagaggtc
tgtgatgaggtcagggcacacctgctggcagacatggcccacatcagtggcctggtggcc
gccaaggtgatcccctcccctttcaagtatgcggacgttgttaccaccaccactcacaag
acactgcgaggggccaggtcagggctcatcttctaccgaaagggagtacggaccgtagac
cccaagactggcaaagagatcccttatacctttgaggaccgaatcaacttcgctgtgttc
ccatccctacagggtggcccccacaaccacgccattgctgcagtagctgtggctctcaag
caggcctgcacccctatgttccgagagtactccttacaagtgctgaggaatgcccaggcc
atggctgatgccctgctcaagcgaggatactcgctggtgtctggtggcactgacacccac
ctggtgctggtggacctgcggcccaagggcctggatggagcccgagccgaacgcgtgttg
gaactcgtctccatcacagccaacaagaacacctgtcctggagaccggagcgccattact
ccggggggcttgaggcttggggccccagcgttgacctctcgccagttccgtgaggacgac
ttccgtagagtcgtcgattttatcgatgagggagtcaacattggcttggaggtgaagcgc
aagacggccaagctccaggatttcaaatccttcctgctcaaggacccagagacaagccag
cgtttggccaacctccggcaacaggtggaacagtttgccaggggcttcccgatgcctgga
tttgatgaacgttga
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