Mus caroli (Ryukyu mouse): 110303046
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Entry
110303046 CDS
T05910
Symbol
Col10a1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
110303046 (Col10a1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
110303046
NCBI-ProteinID:
XP_029338746
Ensembl:
MGP_CAROLIEiJ_G0015236
UniProt:
A0A6P7RT97
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Position
10:30205439..30211872
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AA seq
680 aa
AA seq
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MLPQIPFLLLMFLTLVHGMFYAERYQTPTGIKGPLASPKTQYFIPYAIKSKGIPVRGEQG
IPGPPGPTGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGISAMGKPGLPGPPGKPGER
GPYGHKGDIGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGLTGAPGPRGFPGEKGAPG
APGMNGRKGETGYGSPGRPGERGLPGPQGPIGPPGPPGVGRRGENGFPGQPGIKGDRGFP
GETGPSGPPGPQGPPGKQGREGIGKPGAIGSPGQPGIPGEKGHPGAPGIAGPPGAPGFGK
QGLPGLRGQRGPAGLPGAPGAKGEQGPAGHPGEPGLPGSPGNMGPQGPKGIPGNHGIPGA
KGEIGLVGPAGPPGARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGQKGDPGVGGAPGL
RGPVGPVGAKGVPGHNGEAGPRGEPGIPGTRGPTGPPGVPGVPGSKGDPGNPGAPGPAGI
ATKGLNGPTGPPGPPGPRGHSGEPGIPGPPGPPGPPGQAVMPDGFIKAGQRPRLSGMPLV
SANHGVTGMPVSAFTVILSKAYPAVGAPIPFDEILYNRQQHYDPRSGIFTCKIPGIYYFS
YHVHVKGTHVWVGLYKNGTPTMYTYDEYSKGYLDQASGSAIMELTENDQVWLQLPNAESN
GLYSSEYVHSSFSGFLVAPM
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgctaccacaaataccctttctgctgctaatgttcttgaccctggttcatggaatgttt
tatgctgaacggtaccaaacgcccacaggcataaagggcccacttgctagccccaagaca
caatacttcatcccatatgccataaagagtaaagggattccagtaagaggagaacaaggc
attcctggtccaccaggcccaaccggacctcgaggacacccaggtccctcaggaccgcca
ggcaagccaggctatggaagtcctggactccaaggagagccagggttgccaggaccacca
ggaatatcagccatggggaagccaggcctgccaggcccgccaggcaaaccaggggagaga
ggaccatatggacacaaaggagatattggcccagctggcttacccggacctcggggccct
ccagggccccctggaattcctggcccagctggaatttctgtgccaggaaaacctggacag
cagggacttacaggtgccccaggacctaggggctttcctggagaaaagggtgcaccagga
gcccctggtatgaatgggcggaaaggggaaacaggatatggctctcctggccgtccaggt
gagaggggtcttccaggccctcaaggtcccataggaccccctggcccccctggagtggga
agaagaggtgaaaacggctttccaggacagccgggcatcaaaggtgaccggggtttccca
ggagaaacgggaccatcaggtccaccaggtccccaaggtcctcccgggaagcaaggacga
gaaggtattgggaagccaggagccattggatcccctggtcagccaggtatcccaggagaa
aaaggccacccaggggctccaggaatagctgggcctccaggagctcctggctttggaaaa
caaggcttgccaggtttgaggggacaaaggggacctgctggtcttcctggggctccaggt
gccaaaggggaacaagggccagcaggtcatcctggagaaccgggtctgcctggatcccct
gggaatatgggaccccaaggacctaaaggaatcccagggaaccatggcattccaggcgct
aaaggtgagataggtctggttgggcctgcaggcccccccggggctagaggagcaaggggt
ccacctgggttagatggaaaaacagggtatcctggggagccaggtctcaatggtcctaag
ggtaacccagggttaccaggacaaaaaggtgatcctggagtgggaggagcccctggtctt
cgaggtcctgttggccctgtaggagctaaaggagtgcctggacacaatggtgaggcaggt
ccaagaggtgaacctggaataccaggtaccaggggccccactgggccaccaggtgtccca
ggagttcctggatctaagggtgaccctggaaacccaggtgctccaggcccagctggcata
gcaactaagggcctcaatgggccaactggtcctccaggccctcctggtccaagaggccac
agtggagaacctggtatcccaggtcccccgggtcccccaggaccccccggccaagcagtc
atgcctgatggcttcataaaggcaggccagaggcccaggctttctgggatgccgcttgtc
agtgctaaccatggggtaacaggtatgcccgtgtctgcttttactgtcattctctctaaa
gcttacccagcagtaggcgcccccatcccatttgatgagattctgtacaataggcagcag
cattatgacccaagatctggaatctttacctgtaagatcccaggcatatactatttctcc
taccacgtgcatgtgaaagggactcacgtttgggtaggcctgtataagaacggcacgcct
acaatgtatacgtatgatgagtacagcaaaggctacctggatcaggcttcagggagtgca
atcatggagctcacagaaaatgaccaggtatggctccaattgcccaatgcagaatcaaac
ggcctctactcctctgagtacgtccactcatccttctcaggattcctagtggctcccatg
tga
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