Mus caroli (Ryukyu mouse): 110303092
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Entry
110303092 CDS
T05910
Symbol
Nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110303092 (Nup107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110303092 (Nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110303092 (Nup107)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110303092 (Nup107)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110303092 (Nup107)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110303092 (Nup107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF2310
Motif
Other DBs
NCBI-GeneID:
110303092
NCBI-ProteinID:
XP_021029683
Ensembl:
MGP_CAROLIEiJ_G0015838
UniProt:
A0A6P5QA39
LinkDB
All DBs
Position
10:complement(110540654..110584628)
Genome browser
AA seq
926 aa
AA seq
DB search
MDRSGFGGMSSPVIRDAEVTRTARKHSAHKRVLIQANQEDNFGAATPRSQIIPRTPSSFR
QPFVTPPSRSLLRHPDISYILGTEGRSPRHTQSSGYLGNLSMVTNLDDSNWAAAFSSQRL
GLYTNTEHHSMTEDVNLSTVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYEN
ICGSQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSSLEEENM
FAIAGINASEKMVVEALFQRDSLVRQSQLVVDWLESIAKDEIGEFSDNIEFYAKSVYWEN
TLHSLKQRQLLSYIGSTRPLVTELDPDAPIRQKLPLDDLDREDEVRLLKYLFTLIRAGMT
EEAQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGNPYRRIWKISCWRMADDEL
FNKYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVMTQDDSEELP
REYMEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSG
SSLPGHLLRFMTHLILFLRTLGLQTKEEVSIEVLKTYIQLLISEKHTSLIAFYTCHLPQD
LAVAQYALFLEGVTEFEQRHQCLELAKEADLDVATITKTVVENICKKDNGEFSHHDLAPS
LDTGTTEEDRLKIDVIDWLVFDPAQRAEALRQGNAIMRKFLALKKHEAAKEVFVKIPQDS
IAEIYNQWEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLLSQ
ATFTEKVAYEHREKKYEMDHNIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEDD
PERTHQMVLLRKLCLPMLCFLLHTILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRK
LLQKLRESSLMLLDQGLDPLGYEIQS
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagtggcttcggggggatgtcatcccctgtgatccgggatgcggaggtgacg
aggactgcccggaagcacagtgctcacaaaagagttctaattcaggccaaccaagaggac
aattttggtgctgctacaccaagaagccagatcattcctcgaactccaagctcctttcga
cagccctttgttactccaccgagccgaagcctactgagacacccggatatttcctacatt
cttggaacggaagggaggtctccccggcacacacagtcttctgggtacttgggaaatctt
tccatggtgactaaccttgatgacagcaactgggcagctgcattctcatcccagcgttta
ggactctacacaaacacagagcatcatagtatgaccgaggatgtgaacctaagtactgtc
atgcttcgggaagacgaccctggagaggctgcatccatgagcatgttctctgatttcctg
cagtctttcttgaagcactcttcaaccacagtctttgatctcgtagaagagtatgagaat
atttgtggtagtcaggtgaatatcctcagtaaaatagtgagccgcgcaacacctggactg
cagaagttttccaagactgccagtatgctctggcttctccaacaggagatggtcacatgg
aggctgctcgcctctttgtatagagacagaatacagtcttcattagaagaggaaaatatg
tttgcaattgctggtattaatgccagcgagaagatggttgtggaagcgctgtttcagagg
gactcactggtccggcagagccagttggtggtagattggctagagagtattgccaaagat
gaaatcggagaattctcggacaatattgagttttatgcaaaatcagtatattgggaaaat
accctccactcattaaagcaacggcagctactgtcttacataggaagtacccgtcctctt
gtcactgaactggacccagatgctcccattagacagaagttgccactcgacgatctggac
agagaggacgaggtcagactgctgaagtacctcttcacgctcatccgtgctggcatgaca
gaagaggcacaacggctctgtaaacggtgtgggcaagcatggcgagctgcaaccctggaa
ggctggaaactgtaccatgaccctaatgttaacggagggacagagctagaacctgttgaa
gggaatccatatagacgcatctggaagatcagttgctggagaatggctgacgatgaactt
tttaataagtatgaaagagccatttacgcagcactgagtgggaaccttaagcagctcctt
ccagtctgtgacacgtgggaagacacggtgtgggcctacttccgggtgatggtggacagc
ctggtggagcaggagattcggacatcagtaatgacacaggatgacagtgaggagctccct
cgagagtacatggaagccaattggaccttagaaaaagtttttgaagaacttcaagccact
gataaaaagagagttctggaggagaatcaagaacattaccatatagttcagaaattcctt
atcctgggagacattgatggtttgatggatgaatttagcaaatggctgtccaagagcgga
agcagtctgcccggacacctgctccgcttcatgacacacctcattctgtttctccgcacc
ctaggcctccagaccaaggaagaagtttccattgaagttctaaagacatatatacagctg
ttaataagtgagaagcacacaagcctcatagcgttctatacctgtcatctgcctcaagac
ctcgccgtggcccagtatgccttatttttggaaggtgttacggaatttgagcagcggcac
cagtgcctagagctggctaaggaagcagacttggatgttgcgacgataacgaaaactgta
gttgagaatatttgcaagaaagataatggtgaatttagtcaccatgacctggctccatcc
ctagacactggcactactgaggaggaccgcctgaagattgatgtgatcgactggctcgtg
tttgacccggcacagagagcggaagccctgaggcaaggcaacgccatcatgaggaagttc
ttagcattaaagaaacatgaagctgcaaaagaagtgtttgtgaaaattcctcaggattcc
atcgcagagatctataatcagtgggaggagcaaggcatggagagccctcttcctgccgag
gatgataacgccatccgagagcatttgtgtatcagagcctatctggaagcccatgaaacc
ttcaacgaatggtttaaacatatgaattcggctccacagaaacctacattactatctcaa
gcaacttttacagagaaagtggcttatgaacacagagaaaagaaatacgagatggatcat
aatatttggaaaggacatttggatgccctaactgccgatgtgaaggagaaaatgtacaac
gtcttgttgttcgttgatggaggatggatggtggatgtcagagaggacgccgaggacgac
cctgagcggactcatcagatggttttactgagaaagctctgtctccccatgctgtgcttc
ctgcttcacaccatactacacagcaccggacagtaccaggagtgcctgcagctggccgac
atggtgtcctctgagcgccacaagctctatctggtgttttctaaggaagaactaaggaaa
ctgctgcagaagttaagggagtcctctctaatgctcctagaccagggactcgacccgctt
ggctatgaaattcagtcataa
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