Mus caroli (Ryukyu mouse): 110303179
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Entry
110303179 CDS
T05910
Symbol
Cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110303179 (Cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110303179 (Cnot2)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110303179 (Cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
110303179 (Cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
110303179
NCBI-ProteinID:
XP_021029828
Ensembl:
MGP_CAROLIEiJ_G0015822
UniProt:
A0A6P5QHA5
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All DBs
Position
10:complement(109278899..109372729)
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AA seq
550 aa
AA seq
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MRTVRKGHDSMVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSVF
PHRSEKDMLASPSTSGQLSQFGASLYGQQSALGLPMRGMSNSTPQLNRSLSQGTQLPSHV
TPTTGVPTMSLHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPNRSS
PSIICMPKQQPSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDF
PALADRNRREGSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKD
PTSSNDDSKSNLSTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGM
VTDQFGMIGLLTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRP
QDIDFHVPSEYLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWR
YHKEERVWITRAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPST
FNYNPAQQAF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcgtactgtgaggaaaggacacgactctatggtgaggactgatggacatacattatct
gagaaaagaaactaccaggtgacaaacagcatgtttggtgcttcaagaaagaagtttgta
gagggggtggacagcgactaccatgatgagaacatgtactacagccagtcttctgtgttc
ccacatcggtcagagaaagatatgctggcatcgccatctacgtcaggtcagctgtctcaa
tttggggcaagtttatacgggcaacaaagtgcactaggccttccaatgagggggatgagc
aacagcacccctcagttaaaccgcagcttatcacaaggcactcagttaccgagccacgtc
acgccaacaacaggggtaccaacaatgtcacttcacacgcctccatctccaagcaggggt
attttgcctatgaatcctaggaatatgatgaaccactcccaggttggtcagggcattgga
attcctagcaggacaaatagcatgagcagttcagggttaggtagccccaacagaagctcg
ccaagcataatatgtatgccaaagcaacagccttctcgacagccttttactgtgaacagt
atgtctggatttggaatgaacaggaatcaggcatttggaatgaataactccttatcaagt
aacatttttaatggaacagatggcagtgaaaatgtgacaggattggacctttcagatttc
ccagcgttagccgaccggaatagaagggaagggagcggcaacccaactccattaataaac
cccttggctggaagagctccttacgttggaatggtaacaaaacctgcaaatgagcaatcc
caagacttctcaatacacaacgaagattttccagcattacctggttccagctataaagat
ccaacgtcaagtaatgacgacagcaaatctaatttgagtacatcggggaagacgacttca
agtacagatggacccaaattccctggagataaaagttcaacaacacaaaacaataatcag
cagaaaaaggggatccaggtgttacctgatggtcgagttactaacattcctcaagggatg
gtgacggaccaatttggaatgattggcctgttaacatttatcagggcagcagagacagac
ccaggaatggtacatcttgctttaggaagtgacttaacaacattaggcctcaatctgaac
tcacctgaaaatctctatcccaaatttgcatcaccctgggcttcttcaccttgtcggcct
caagacatagacttccatgtcccatcagaatacttaacaaacattcacattagggataag
ctggctgcaatcaaacttggccgatatggagaagacctcctcttctatctgtattacatg
aacggcggggatgtattacaactcttagctgcggtagaactctttaaccgtgattggaga
taccataaggaggagcgggtatggatcaccagggcaccaggcatggagccaacaatgaaa
accaacacgtacgagcgggggacctactacttctttgactgtctcaactggaggaaagta
gctaaggagttccatctggaatatgacaaattagaagagcggcctcacctgccatccacc
ttcaactacaaccctgctcagcaagccttctaa
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