KEGG   Mus caroli (Ryukyu mouse): 110303180
Entry
110303180         CDS       T05910                                 
Symbol
Polr2e
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03020  RNA polymerase
mcal03420  Nucleotide excision repair
mcal04623  Cytosolic DNA-sensing pathway
mcal05016  Huntington disease
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    110303180 (Polr2e)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110303180 (Polr2e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    110303180 (Polr2e)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05016 Huntington disease
    110303180 (Polr2e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mcal03021]
    110303180 (Polr2e)
   03400 DNA repair and recombination proteins [BR:mcal03400]
    110303180 (Polr2e)
Transcription machinery [BR:mcal03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     110303180 (Polr2e)
  RNA polymerase III system
   RNA polymerase III
     110303180 (Polr2e)
  RNA polymerase I system
   RNA polymerase I
     110303180 (Polr2e)
DNA repair and recombination proteins [BR:mcal03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      110303180 (Polr2e)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C NA-iREase1
Other DBs
NCBI-GeneID: 110303180
NCBI-ProteinID: XP_021029833
Ensembl: MGP_CAROLIEiJ_G0015561
UniProt: A0A6P5QIT7
LinkDB
Position
10:complement(74018860..74023078)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYVLEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRESQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggacgacgaggaggagacctaccggctgtggaagatccgcaagacgatcatgcagctg
tgtcatgaccgtggctacctggtgacccaggatgaactggaccagacacttgaggaattc
aaggcgcagtttggggacaagcccagcgaaggacggccaaggcgcacagacctcacagtg
ctggtggcccacaacgatgaccccacagaccagatgtttgtgttcttcccagaggagccc
aaggtgggcatcaagactatcaaggtatactgccagcgcatgcaggaggaaaacatcaca
cgggcactgattgtggtgcagcagggcatgacgccctccgccaagcagtccctggtggac
atggccccgaagtacgtgctggaacagtttctacagcaggagctgctcatcaatatcaca
gaacacgagctagtccctgagcacgtggtcatgacaaaagaggaggtgactgaactgctg
gctcgatacaagcttcgtgagagccagctacccagaatccaggctggggacccagtggca
cggtactttgggatcaagcgagggcaggtcgtgaagatcatccgccccagtgagacggcc
ggccgctacatcacctaccgcctggtgcagtag

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