Mus caroli (Ryukyu mouse): 110303360
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Entry
110303360 CDS
T05910
Symbol
Ddx21
Name
(RefSeq) nucleolar RNA helicase 2 isoform X1
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcal03009
]
110303360 (Ddx21)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110303360 (Ddx21)
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110303360 (Ddx21)
Ribosome biogenesis [BR:
mcal03009
]
Eukaryotic type
Pre-60S particles
Helicases
110303360 (Ddx21)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
110303360 (Ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
CMS1
Cas3-like_C_2
AAA_30
Motif
Other DBs
NCBI-GeneID:
110303360
NCBI-ProteinID:
XP_021030126
Ensembl:
MGP_CAROLIEiJ_G0015388
UniProt:
A0A6P5QP34
LinkDB
All DBs
Position
10:complement(57088152..57108786)
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AA seq
777 aa
AA seq
DB search
MPGKLRSGAKLGSDEAEESMETLPKPSEKKTRKEKTKSKTEEATEGMEEAASSNAKKTNK
KGPSEDDVDPPKSKKAKKQEEEPQDDTASTSKTSKKKKEPLEKEAASETKEIITEEPPKE
EADMPKPKKMKKGKEANGDAGEKSPRVKNGLSQPSEPKSNSSDAPGEESSSETEKEIPVE
QKEGAFSNFPISEETVKLLKARGVNFLFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAI
PLIEKLQGGLQERKRGRAPQVLVLAPTRELANQVSKDFSNITKKLSVACFYGGTPYGGQI
ERMRSGIDILVGTPGRIKDHLQNGKLDLTKLKHVVLDEVDQMLDMGFADQVEEILCVAYK
KDSEDNPQTLLFSATCPHWVFNVAKKYMKSTYEQVDLIGKKTQKAAITVEHLAIKCHWSE
RAAVIGDVIRVYSGHQGRTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKG
FRNGSFGVLVATNVAARGLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQ
KKEEYQLAQVEQKAGIKFKRIGVPSASEIIKASSKDAIRLLDSVPPTAISHFKQSAEKLI
EEKGAVEALAAALAHISGATSVDQRSLINSQAGFVTMILRCSIEMPNISYAWKELKEQLG
ESIDAKVKGMVFLKGKLGVCFDVRTEAVTEIQEKWHDSRRWQLTVATEPPELEGPPDGYR
GRMGQRDGSRGAFRGQRGGSRNFRGQGQRGGSRNFRGQRPGGGNRGQKRSFGKAFGQ
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgccgggaaaactccgcagtggggccaagttgggctcagacgaggccgaggagagcatg
gagacgctgccgaagccaagtgagaagaaaactagaaaagagaagacaaaatcaaagacc
gaagaagcaacagaaggaatggaagaggccgcttcctccaatgcaaagaaaacaaacaag
aaagggccttctgaagatgatgtggatccccctaaatccaagaaggccaagaagcaggag
gaggagcctcaagacgacactgcttctacaagcaaaacctccaagaagaaaaaggagccc
cttgagaaggaagcagcctctgaaaccaaagagataataacagaggagcctcccaaagaa
gaggcagacatgcctaagcccaagaagatgaagaaagggaaggaagcaaacggagatgcg
ggagagaaaagccccagggtgaagaatggactctcccaaccttctgaaccgaaatccaac
tccagtgatgctcctggtgaggaaagtagtagcgagacagaaaaggaaatacctgtggag
cagaaagaaggagctttctctaattttcccatatctgaagagactgtcaagcttcttaaa
gctcgtggggtgaacttcctgtttcctatacaagccaagaccttccaccatgtgtacagt
gggaaagacttaattgcccaggcacggacaggcaccgggaagacattctcttttgccatc
cctttaattgagaaacttcaaggtgggctacaagagaggaagagaggccgagcccctcag
gtgctagtccttgcacccacaagagaattagcaaatcaagtgagcaaagacttcagcaac
atcaccaaaaagctgtccgtagcttgtttttatggtggaacaccctacggtggtcagatt
gaacgaatgcggagtgggattgatatactggttgggaccccaggtcgtattaaagaccac
ttgcagaatggcaagctagatctcaccaaacttaaacacgttgtcctggatgaagtcgac
cagatgttggatatgggttttgctgatcaagtggaagaaattttatgtgtggcatacaag
aaagattctgaagacaacccccaaacattgcttttctctgcaacttgccctcattgggta
tttaatgttgctaagaaatacatgaaatctacatacgaacaggtggacctgattggtaaa
aagactcagaaagcagctataactgtggagcacctggcgattaagtgtcactggtcagaa
agggcagcggtgattggggatgtgatccgagtgtacagtggtcatcaggggcgcacgatc
atcttctgtgaaaccaagaaggatgcccaggagctatctcagaacacgtgcataaagcag
gatgcccagtccttacatggcgacattccacagaagcaaagggaaatcaccctgaaaggt
ttccgaaatggcagttttggagttttggtggcgaccaatgttgctgcccgtgggttagac
atccctgaggttgacttggttgttcagagctgtccaccaaaggatgtagagtcttacatt
catcgttcggggcggacaggcagagctggaaggacaggggtttgcatctgcttttaccag
aaaaaagaagagtaccagttagcacaagtggagcagaaagcgggaattaaatttaaacgg
ataggtgttccttctgcatcggaaataataaaagcctccagcaaagacgccatcaggctc
ttggattctgtgcctcccactgccattagccatttcaagcagtcagctgagaagctgatt
gaggagaagggagctgtagaggccctggcagctgctctggcccacatctcaggagccaca
tccgtcgatcagcgctccctgatcaactcgcaagcaggctttgtgaccatgatcctacgc
tgctccattgagatgcccaacatcagttacgcttggaaagaacttaaggagcagctgggc
gagagcatcgatgccaaagtgaaaggaatggtcttcctcaaaggaaaactgggggtttgt
tttgatgtccgcactgaagcagtcacagaaatacaggagaagtggcatgattcgagacgc
tggcagctcaccgtggccaccgagccgccagagctggagggacctccagacggctatcga
ggccgcatgggtcagcgtgatggcagccgcggtgctttcagaggacagcggggtggaagc
aggaacttccggggccagggacagcggggtggaagtagaaacttccgaggacagcgacca
ggaggtggcaacaggggccagaagcggagttttggtaaagcgtttggtcagtga
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integrated database retrieval system
