Mus caroli (Ryukyu mouse): 110303460
Help
Entry
110303460 CDS
T05910
Symbol
Smpd2
Name
(RefSeq) sphingomyelin phosphodiesterase 2
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal00600
Sphingolipid metabolism
mcal01100
Metabolic pathways
mcal04071
Sphingolipid signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
110303460 (Smpd2)
09130 Environmental Information Processing
09132 Signal transduction
04071 Sphingolipid signaling pathway
110303460 (Smpd2)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
110303460 (Smpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
110303460
NCBI-ProteinID:
XP_021030210
Ensembl:
MGP_CAROLIEiJ_G0015268
UniProt:
A0A6P5QP96
LinkDB
All DBs
Position
10:complement(36949431..36952621)
Genome browser
AA seq
419 aa
AA seq
DB search
MKLNFSLRLRVFNLNCWDIPYLSKHRADRMKRLGDFLNLENFDLALLEEVWSEQDFQYLR
QRLSLTYPDAHYFRSGMIGSGLCVFSKHPIQEIFQHVYSLNGYPYMFHHGDWFCGKAVGL
LVLHLSGLVLNAYVTHLHAEYSRQKDIYFAHRVAQAWELAQFIHHTSKNADVVLLCGDLN
MHPKDLGCCLLKEWTGLHDAFVEAEDFKGSDDGCTMVPKNCYVSQQDLGPFPSGIRIDYV
LYKAVSGFHICCETLKATTGCDPHSGKPFSDHEALMATLYVKHSPPQEDPCPAHGPPEKS
DLISVLREARTELGLGIAKARWWAAFSGYVIIWGLSLLVLLCVLAAGEEAREVAIILCTP
SVGLVLVAGAVYLFHKQETKGLCQAQAEMLHVLTRETETQDRGSEPHLAHCLQQEEDRA
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacttttctctgcggctgagagttttcaatctcaactgctgggacatcccc
tacctgagcaaacatagggcggaccgcatgaagcgcttgggagactttctgaacttggaa
aactttgatctggctctcctggaggaggtgtggagtgagcaggacttccagtacctaagg
caaaggctatcgctcacctatccagatgcacactacttcagaagcgggatgataggcagt
ggcctctgtgtgttctccaaacacccaatccaggaaatcttccagcatgtctacagtctg
aatggctacccctacatgttccatcatggagactggttctgtgggaaggctgtggggctg
ctggtgctccatctaagtggactggtgctcaatgcctacgtgactcatctacatgctgag
tacagccgacagaaggacatctactttgcacaccgtgtggcccaagcttgggaactggcc
cagttcatccaccacacatccaagaatgcagatgtggttctgttgtgtggggacctcaac
atgcaccccaaagacctgggctgctgcctgctgaaagagtggacagggctccatgatgct
ttcgttgaggctgaggactttaagggctctgatgatggctgtaccatggtacccaagaac
tgctatgtcagccagcaggacctgggaccgtttccgtctggcatccggattgactacgtg
ctttacaaggcagtctctgggttccatatctgctgtgagactctgaaagccactacaggc
tgtgacccccacagtggcaagcccttctctgatcacgaggccctcatggctactttgtat
gtgaagcacagcccccctcaggaagacccctgtcctgcccatggcccaccggaaaagtcc
gatttaatcagcgtgctaagggaggcgaggacagagctggggctaggcatagctaaagct
cgctggtgggctgcattctctggctatgtgatcatttgggggctgtccctcctggtgttg
ctgtgtgtcctggctgcaggagaagaggccagggaagtggccatcatcctctgcacaccc
agtgtgggtctggtgctggtggcaggtgcagtctacctcttccacaagcaggaaaccaag
ggcttatgtcaggcccaggctgagatgctgcatgttctgacaagggaaacggagacccag
gaccgaggctcagagcctcacctagcccactgcttgcagcaggaggaggacagagcttag
DBGET
integrated database retrieval system
