Mus caroli (Ryukyu mouse): 110303810
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Entry
110303810 CDS
T05910
Symbol
Edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04060
Cytokine-cytokine receptor interaction
mcal04064
NF-kappa B signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
110303810 (Edar)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110303810 (Edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
mcal04050
]
110303810 (Edar)
Cytokine receptors [BR:
mcal04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
110303810 (Edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
110303810
NCBI-ProteinID:
XP_029338165
Ensembl:
MGP_CAROLIEiJ_G0015336
UniProt:
A0A6P7RT38
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Position
10:complement(53132944..53162432)
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AA seq
448 aa
AA seq
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MAHVGDCKWMSWLPVLVVSLMCSAKAEDSNCGENEYHNQTTGLCQQCPPCRPGEEPYMSC
GYGTKDDDYGCVPCPAEKFSKGGYQICRRHKDCEGFFRATVLTPGDTENDAECGPCLPGY
YMLENRPRNIYGMVCYSCLLAPPNTKECVGATSGVSAHSSSTSGGSTLSPLQHAHKELSG
QGHLATALIIAMSTIFIMAIAIVLIIMFYIMKTKPSAPACCSSPPGKSAEAPANTHEEKK
EAPDSVVTFPENGEFQKLTATPTKTPKSENDASSENEQLLSRSVDSDEEPAPDKQGSPEL
CLLSLVHLAREKSVTSNKSAGIQSRRKKILDVYANVCGVVEGLSPTELPFDCLEKTSRML
SSTYNSEKAVVKTWRHLAESFGLKRDEIGGMTDGMQLFDRISTAGYSIPELLTKLVQIER
LDAVESLCADILEWAGVVPPASPPPAAS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgtcggggactgcaaatggatgtcctggctcccagtgctggtggtgtctctg
atgtgctcagccaaggcagaggactccaactgtggtgagaacgaataccacaaccagact
accgggctgtgccagcagtgtcctccatgcagaccaggggaggagccctacatgtcctgt
ggatacggcactaaagacgatgactatggctgtgtgccctgccctgcagagaaattctcc
aaaggaggttatcagatatgcaggcgccacaaagactgcgagggcttcttccgggccacc
gtgctgacaccaggagacacggaaaatgacgctgagtgtggcccgtgtctccctggctac
tacatgctggaaaacagacccaggaacatctatggcatggtctgctactcctgtctcttg
gcacctcccaacaccaaggaatgtgtgggagccacttctggggtttcagctcactcatcc
agcacttccggtggcagcaccttgtctcccttgcagcatgctcacaaagagctctcaggc
caaggacacctggccaccgccctgattattgccatgtctacgatcttcatcatggccatt
gccattgtcctcatcatcatgttctacatcatgaagactaagccgtcagctccagcctgc
tgtagcagtcccccaggaaagagtgcagaagccccagctaacacacacgaggagaaaaaa
gaggccccagacagtgtggtgactttccctgagaatggtgaattccagaagctgacagca
acacccacaaagacccccaaaagtgagaacgatgcctcctctgagaacgagcagttgcta
agtcgcagtgtggacagtgatgaagagccagccccggacaagcaggggtccccagagcta
tgtctgctgtcgctagttcacctggccagggagaagtctgtaaccagtaacaagtctgct
gggatccagagccggaggaaaaaaatactggatgtgtatgccaacgtgtgtggtgttgtt
gaaggtctcagccccaccgagttgccgtttgactgccttgagaagacaagccgaatgctc
agctctacatacaactctgagaaggcagtcgtgaaaacatggcgccaccttgccgagagc
tttggactgaagagggatgagattgggggcatgactgacggcatgcagctctttgaccgc
atcagcaccgcgggctacagcatcccagagctgctcacaaagttggtgcagatcgagcgg
ctggatgctgtggagtccttgtgtgcagacatattggagtgggctggggttgtaccacct
gcctccccacccccagctgcgtcctga
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