Mus caroli (Ryukyu mouse): 110303934
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Entry
110303934 CDS
T05910
Symbol
Tdrd5
Name
(RefSeq) tudor domain-containing protein 5 isoform X1
KO
K18407
tudor domain-containing protein 5
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mcal03036
]
110303934 (Tdrd5)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110303934 (Tdrd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OST-HTH
TUDOR
Motif
Other DBs
NCBI-GeneID:
110303934
NCBI-ProteinID:
XP_021030839
Ensembl:
MGP_CAROLIEiJ_G0014733
UniProt:
A0A6P5QCW6
LinkDB
All DBs
Position
1:complement(146923488..146967301)
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AA seq
1034 aa
AA seq
DB search
MSEQERIQDCLRKEIRSLLISTKDGLTPQQLEKEYLLMVGNHLPLRILGYRSTMELVLDM
PDVVSVCPGGDGTVILKAIPDESTKGIASLVAKQRRSHKVRNPMPKGRPSTCSGRVPYRG
RVPPILPAVVKSELKDLLALSPVLLSDFEKAFARRFGRSFQYMQYGFLSMFEVLNAASDV
ISVEQTRAGSLLTLKKSVSEDKQRGWPAGKVFTQPFRMKQQGSYSTGFPVMKAHFSQPIS
NMEPPKQVLGMEKTPMFNSVEASRLNHTEKLNQLESTFKSVIAQIGPGGTVDPDLKRKIQ
FVVSKFPQGLFISKLLGEFELTFKEQLSPKQLGFLNVTELVGALSDILRVEFSEERQDLL
VFDADLKPLPSGGPLSSVRNSCLVQPDQNTEANTWASSLSRNSLSTVAVKKTTWDCPLKN
HKEPEQKMYKKPNVVVKPLQLQVETNKPQLGLSVINHDIPPDAVRAKKLCRLPPLDTSTL
VGVFVEYIISPSQFYIRIYSRDSSELLEDMMIEMRRCYSNQLVSDRYIMPEYFIQPGHLC
CVKISEDKWWYRVIIHRILGKKEVEVFYPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCS
LAWVRPAEEHWTARAILHFQKLCGLKPLVGVVDEYIDGILNIFLCDTSSNEDVYFHHVLR
TEGHAIVCRENAPSKGFRDFNPPALYTNASSAGDMVLTELGHPAQQHYLNEDQEILQQAQ
QDINDEKCISYLKSAPKELLKDSKLSSLKTHKSCEEDPRWSILQPKDLKEENEDEVPTGM
PCLESVTIGDDVWDENWLPLQAKMGKAGSPASQLFTSNLVGKKQYQTRGEMAQKDWCFST
SKDIWDDSWQPLGLANDVKGGIHTPEGPIAQEKNTSTTRIQQQPDLQYPLDSSTLPKLEE
FYISLMKSQQSAERSQSEPASIQTHAGLSSTPAVGDSPENHSGSVESSPGSLKKEDVSNS
RAEAAAKDKSQGAIDQLSFILSPQHQISQKLYIPRSTATAVLGAAARLATSRSLLHWYPS
VKGGKLEAERDGVK
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagagcgtatacaggactgtctgaggaaagagataaggtcccttcttatt
tccactaaagatggtttgactccacaacagttggaaaaggagtaccttttgatggttggc
aaccatctcccgctccgaatccttggatatcggtccactatggaactggtgttggatatg
cccgatgtggttagtgtctgccccggcggggatggtaccgtaatactgaaagccattcca
gacgaatccaccaaaggaatagcaagtttggttgcaaagcagagaaggagccataaggtc
cgaaaccccatgccaaaggggagacccagcacctgctctggccgggtgccttaccgagga
agggtgcccccaattcttccagctgtagtgaagagtgagttgaaagaccttttggcattg
tctcctgttctcctttctgactttgaaaaggcatttgccaggcgttttggacgatcattt
cagtatatgcagtatggattcctctctatgtttgaagtgctgaatgcagcttcggatgtc
atttctgtagagcagaccagagcaggttctctgttgacactaaaaaagagtgtatcagag
gacaagcagagaggatggccagcaggtaaagtttttactcagccatttagaatgaaacaa
caggggtcatattctacaggattcccagtaatgaaggcacacttttcacaacccatttca
aatatggagccccccaaacaagtactgggcatggagaagacacccatgtttaattcagtg
gaggcttcaaggctgaaccacactgaaaaattaaatcagttggagagcacattcaaatca
gtgattgcacagattggacctggagggactgttgatcccgacctaaagcgcaagatacaa
tttgtcgtatctaagtttccacaaggtttgtttatttctaaactgcttggagaatttgag
ctaacttttaaagagcaactttcaccaaaacaattagggttcttaaacgtgacagaactt
gttggcgctcttagtgacattctccgagttgagttcagtgaagaaaggcaagacttgctc
gtgtttgatgctgacctgaagcctctgccgtctggtggaccactttcatcagtcagaaat
tcgtgtttagttcaaccagaccagaacacagaagctaacacttgggcttccagtctctcc
agaaattcactatccactgtagcagttaagaagaccacgtgggattgccctttgaagaac
cacaaggagccagaacagaagatgtacaagaagcctaatgtggtggtcaagcctctgcag
ctgcaggtagaaacaaacaaaccacagctcggcctgtcagtgataaaccacgatatccca
ccagatgctgtgcgtgccaagaaattgtgcagacttcctccattagataccagcaccctt
gtgggggtcttcgtggagtatataatctcccctagtcagttctacatccggatctacagc
agagattcatcagagctacttgaagacatgatgattgaaatgcgacgctgctactccaac
cagctggtctctgaccggtacattatgccagaatattttatccaaccaggacatctctgt
tgtgtaaagatctctgaggacaagtggtggtaccgggttattatccatcggatccttggg
aaaaaggaagttgaagtgttctacccagatttcggaaatatcggaactgtgcagaagtcc
tcgctgaggttcctcaaatgctgctacacaaagcttccagctcaggctatcccttgctct
ttggcgtgggtgaggcccgcagaggaacactggacagccagagctattttgcacttccag
aagctgtgtggtttgaagcccttggtcggggtggtggatgagtatatagacggaatcctt
aatatttttctttgtgatacgtcctcaaatgaagatgtgtattttcatcatgtcttgagg
acagaaggccatgctattgtatgccgagaaaatgccccatccaagggcttcagggatttc
aacccaccagctctgtacactaacgccagctcagcaggtgacatggtcctgacagagctg
gggcatcctgctcagcagcactatttgaatgaagaccaagagatactgcagcaagcccag
caagatattaatgatgaaaagtgtataagttaccttaaatctgcgcccaaggaattatta
aaggattctaaattgagttcattgaaaacacataagagctgtgaagaggacccacggtgg
tccatcctgcagcccaaggatctgaaggaagaaaatgaggatgaggtccctactggaatg
ccatgcctggagtcagtgaccataggtgacgatgtttgggatgagaactggctccctcta
caggccaaaatggggaaggcagggagtcctgcctcccagctgtttacttcaaaccttgtt
gggaagaaacaatatcagacacgtggagaaatggcacaaaaggactggtgtttttctaca
tctaaagatatatgggatgattcctggcagcccttaggccttgcgaatgatgtgaaagga
ggaattcacacaccagaagggcccattgctcaagaaaaaaataccagcacaacccgaatt
caacagcagccagacttacagtatcctttggattcttccacactgcccaaactggaagag
ttctacatctctctgatgaagtctcagcagtctgcagagaggagccagtctgaacctgcc
agcattcagactcatgccggactcagttcaacccctgcagtgggtgactctccagaaaac
cactctggctctgtggaaagctctccagggagcctaaagaaagaagatgtttctaatagc
cgtgctgaagccgcggccaaggacaagagtcagggagccatagaccagctctctttcatt
ttgtccccccagcaccagatttctcagaagctctacatccctcgaagtacagccacagct
gtcttgggagctgcggcacggttagccacgtccaggagcctcctgcactggtaccccagt
gtgaaaggagggaaacttgaggcagagagagatggagtgaagtaa
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