Mus caroli (Ryukyu mouse): 110304251
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Entry
110304251 CDS
T05910
Name
(RefSeq) ATP-binding cassette sub-family A member 8-B isoform X1
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110304251
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110304251
Transporters [BR:
mcal02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
110304251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
SMC_N
AAA_29
AAA_15
AAA_22
AAA_23
MMR_HSR1
Dynamin_N
nSTAND1
Motif
Other DBs
NCBI-GeneID:
110304251
NCBI-ProteinID:
XP_021031148
Ensembl:
MGP_CAROLIEiJ_G0017355
UniProt:
A0A6P5QRG2
LinkDB
All DBs
Position
11:complement(105821772..105881696)
Genome browser
AA seq
1619 aa
AA seq
DB search
MIKREISVRQQTCALLQKNLLKKWRLKRETLMEWVSSLLLLLFLYWYPHGHEATDLSSVP
TKDLGRVDSFRQSGFVIGYTPVTSMTQQIMEKVAATPFVADKKVLGLLDEENIKELAESH
AEVIRVIFSDTFSYHLKFQFGQRIPTSRELRDHNAHCDGLYEDANCLIAIFWKEGFVALQ
AAINAAIIETTTNHSVMEELLSVSGKFMKIHPFVSQEGILTDFFIFTCIISFSPITYYVS
INVARERKRMRGLMMMMGLRDPAFWLSWGLLYAGFVFIMAISLALVIKSVQFFILTSFMM
VFSLFLLYGLSMITLAFLMSVLVRKSVLTGLSVFLLTIFWGSLGFTALYRYLPASVEWTL
SLFSPFAFTLGMAQLLRVDYDLNSNAPPDPASGSNLIIATNFMLVFDAFLYLALMMYFEK
VLPNEYGHQHSPLFFLKSSFWLRTRKPAHVILEDGIDPVPSSDDSFEPVSPEFHGKESIR
IRNISKEYKGKPNKIEALKDLTLDVYEGQITAVLGHSGAGKSTLLNILSGLSVPTKGSVT
IYNNKLSEMADLENILRIAGVCPQANVHFDFLTVRENLRLFAKIRGIPPQDVEKEVQRVL
LELEMKNIQNILAQNLSGGQKRKLTFGIAILGDSQIFLLDEPTAGLDPFSRHRVWNLLKE
RRADRVVLFSTQFMDEADILADRKVFISNGKLKCAGSSLFLKKKWGVGYHLSLQLKEVCV
PGNITSLVKQHIPAAKLSAEGEGKLLYTLPLETTYRFPELCQSLDSCPGLGIENYGVSMT
TLNEVFLKLEGKATIDEPEVDIVGEGQTERSGDTERLMEMEQTLSSLRETEKTGSMALWR
QQTCAIAKVRLLKLKHERKTLLSVLLILVVGICPLLFENITAKIRQSSYTWELSPHDYFL
APGQQPQGMLTQLLIINKTEASIDDFIHSVERQNIALEVDASGARDGTDDPSYNGALIVS
GNEKNHSFSFACNTKRLNCFPVLMDILSNGLLGMVKPSARIQTDRSTYLVDEITHPLEGL
GKTAFWLILTSACPPYIAMSSVTDYKNKAWFQLRVSGLFPSAYWVGQAMVDIPLYCFVFL
FMSLMDYLLRFPDTMFSIISHVIQIPCSVGYAISLIFLTYVISFISRKGKKNSGIWSLSF
FIITVFSVAVMLLAFDVSGTQYCFIFLIPPSTLVGCLILSMHLFIYRIFEGGQIVEPFLV
FLIPFLHVFIFIFTLRCLEWKFGKKTMRKDPIFRISPRNNDVYQNPEEPEDEDEDVQMER
MRTANALVSTSFDEKPVIIASCLRKEYAGKWKHCLSKKKAKIATRNVSFCVRKGEILGLL
GHNGAGKSTSLKMISGDTKVTAGQVLLKGSREGDTPGFLGYCPQENALWPNLTVKEHLEV
FAAVRGLSKSHAAVAITRLADALKLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSILLLD
EPSTGLDPEGQQQIWQAIRAIIKNTDRGALLTTHYMAEAEALCDRVAILVSGRLRCIGSI
QHLKSKFGKDYLLEMKVKTLEQVEPLNTEVLRLFPQASRKERYSLLMAYKLPVEAVQPLS
QAFFKLEKVKQTFDLEEYSLSQSTLEQVFLELSKEQELDGFEEELDSSIKWKLLPQEEA
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagagagagataagtgtgcgccaacaaacttgtgctttattacagaagaacctt
cttaagaaatggagactgaaaagggagaccttgatggagtgggtgagctccttgctcctt
ctgcttttcttatattggtatccccatggtcatgaagctactgacctgtcttcagtgccc
accaaggatctgggacgagtcgattcttttagacaatctgggttcgtgataggctacacg
cctgtcaccagcatgacacaacagataatggagaaggtagctgcgacccctttcgtggca
gataaaaaagtcttgggactgctggatgaagaaaacatcaaggaattagcagaaagtcat
gcagaagtaataagagtcattttttctgacacattctcataccatctgaaattccagttt
ggacagagaatcccaacatcgagggaactcagagaccataatgctcattgtgatggactg
tatgaagatgccaactgtctgatagccatattctggaaggaaggatttgtggctcttcaa
gctgccatcaatgctgccatcatagaaaccacaacaaaccattcagtgatggaggaactg
ctctcagtttcggggaaattcatgaagattcatccttttgtcagtcaagaaggaattctg
actgatttcttcatttttacctgcatcatttccttctccccaatcacctattatgtgtca
atcaatgttgcaagagagaggaaaaggatgaggggcttgatgatgatgatgggccttcga
gatccagcattctggctatcttggggtctgctctatgctggctttgtcttcattatggct
atatccctggcactcgttatcaaatctgtccagttttttattctaaccagcttcatgatg
gtctttagcctcttcctcctttacggattgtctatgatcactttggctttcctaatgagc
gtcttggtgaggaagtctgtcctcactggcctgtctgtgtttcttctcaccatcttctgg
ggaagtctaggcttcacagccctgtacagatacctccctgcatctgtggaatggactctc
agtctttttagcccctttgccttcacactaggaatggcccagctcttacgtgtggactat
gatttaaattctaatgcaccccctgatccagccagtggctcaaatctgattatagcaacc
aatttcatgctggtatttgatgcgtttttgtatctggccctgatgatgtactttgaaaaa
gttctgccaaatgaatatggacatcagcactctcccctgtttttcctgaaatcctcattt
tggctacgaacacgaaagcctgctcatgtgattcttgaagatggaatagaccccgttcct
tcatcagatgactcgtttgaaccggtgtccccagaattccacgggaaagaatccatcaga
atcagaaatatttcaaaagaatacaaaggaaagcccaataaaatagaagccttaaaagac
ctgacgttggacgtatatgaaggccaaatcacagcagtacttggtcacagtggagctgga
aaatcaacattgttaaatattcttagtggattatctgttcctactaaaggttctgtcacc
atctataataataaattatcagaaatggctgaccttgaaaacatcttgaggattgctgga
gtttgtccacaagccaatgttcattttgacttccttactgtgagagaaaacctcaggctt
tttgctaaaataagaggaattccaccccaagatgtggagaaagaggtacaaagggttttg
ctagaattggaaatgaaaaatatccaaaatatccttgctcaaaacctaagtgggggacag
aagagaaagctaacttttggaatcgccattttaggagattctcagatttttctactggat
gagcccaccgctggcctggatcccttttcaaggcaccgggtatggaatctcctgaaggag
cgcagagcagaccgtgtggtcctcttcagcacgcagttcatggatgaggctgacatcctg
gctgataggaaagtgttcatctccaatggaaagctgaagtgtgcaggatcatcgctcttt
ctgaagaagaaatggggagtggggtatcacttaagtttgcagctgaaagaagtctgtgtt
ccaggaaacatcacatcgcttgttaaacagcacatccctgcagctaagctatcagctgaa
ggggaagggaagctactctatacattacccttagaaacaacttatagatttccagagctt
tgccagagtcttgacagctgtcctggactgggaattgaaaactatggtgtttccatgaca
actttgaatgaggtgttcctgaagctagaaggaaaagcaacaattgatgaaccagaggtt
gacatcgtgggagaagggcaaacagagagatctggggacacagaaaggcttatggagatg
gagcaaactctctcttcacttagggaaacagagaagacaggcagcatggcactctggagg
cagcaaacctgtgcgatcgcaaaggttcgcctgttgaagttaaagcacgaaaggaaaaca
cttttatctgtgctcttgatactggtagtcggcatctgtcctcttcttttcgaaaatatc
acagcgaaaatacgtcaaagctcttacacttgggaactttccccacacgattacttcctt
gctccgggacaacagccccagggcatgctcactcagttattgatcattaataagacagag
gcaagcattgacgactttatccattctgtggagcgccagaacatagctttggaagtcgac
gcttctggagccagagatggtacagatgacccatcctacaatggagcccttatagtgtct
ggcaatgagaagaaccacagcttttcgtttgcatgcaacaccaagagactgaactgcttc
ccagttctgatggacatcctgagcaacgggctacttggaatggttaaaccgtcagcccgc
atccaaaccgacagaagcacgtatctcgtggatgaaattactcatcctttagaaggccta
gggaagactgcattctggctgattctgacctccgcttgccctccttatattgccatgagc
agcgtcacagactataagaacaaagcttggttccagctgcgggtctccggcctcttccct
tcggcttactgggtcgggcaggcaatggtggacattcccctgtactgctttgtcttcctc
ttcatgtcgttaatggactaccttttacgcttcccagataccatgttttctattataagt
cacgtcatacaaatcccgtgttctgttggctatgccatatccctgatcttcttaacatac
gtgatttcgttcatttctcgcaaggggaaaaaaaacagcggcatttggtcacttagcttc
tttatcatcactgtgttctcagtggctgtaatgttgctggctttcgacgtgagtggtaca
cagtactgcttcatctttttgataccgccgtccactctggttggatgcttgatcttgtct
atgcatcttttcatatatcggatctttgaaggaggacaaattgtagagccattcctggta
ttcctcattcctttccttcatgttttcatttttatttttacccttcgatgtctggaatgg
aagtttggaaagaaaacgatgaggaaagatcccatctttagaatttctccaagaaacaat
gatgtgtatcaaaacccagaagagccagaagatgaggatgaagatgttcaaatggagaga
atgagaacagcgaatgccttggtatccaccagttttgatgagaagccagtcatcattgcc
agctgcctacgcaaagaatatgcagggaagtggaagcattgcctttccaagaagaaggct
aagatagccaccaggaatgtctcattttgtgtcaggaaaggtgagattctaggattgttg
ggacacaatggagctggcaaaagtacatctcttaaaatgataagtggagacacaaaagtc
acagctgggcaggtgttactgaaagggagcagagaaggggacaccccagggttcctgggg
tactgtcctcaggagaatgccctgtggcccaacctcactgtgaaggagcacctggaggta
tttgctgcagtgaggggcttgagcaaaagtcatgctgcagtcgccatcacaaggttggca
gatgcactcaagctgcaggaccagctgaagtctcctgtgaagacactgtcagagggagtg
aagagaaagctgtgcttcgtgctgagtatcctggggaacccatctatattgcttctggat
gagccgtccactgggctggatcctgaggggcagcagcaaatatggcaagcaatcagggcc
atcataaaaaatacagacaggggtgccctgctgaccacccattacatggcagaggctgag
gctctgtgtgaccgagtggccatcctggtgtctggaaggttgaggtgtattggatccatc
caacatctcaaaagcaaatttggcaaagattacctgctggagatgaaggtgaagaccctc
gagcaggtggagcccctcaatacggaggtcctcaggcttttcccccaggcttctaggaag
gaacggtactctcttctgatggcttacaaattaccagtggaagctgtgcagcctttatcc
caagctttcttcaagttggagaaagttaagcagacctttgacctggaggagtacagcctc
tctcagtctaccctggagcaggtcttcctagagctctccaaggagcaggagctggatggc
tttgaggaagaattagactcctccataaagtggaagctcctcccacaggaagaggcttaa
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integrated database retrieval system
