Mus caroli (Ryukyu mouse): 110304386
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Entry
110304386 CDS
T05910
Symbol
Ebf1
Name
(RefSeq) transcription factor COE1 isoform X4
KO
K09103
early B-cell factor
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110304386 (Ebf1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
110304386 (Ebf1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
110304386
NCBI-ProteinID:
XP_021031387
Ensembl:
MGP_CAROLIEiJ_G0016233
UniProt:
A0A6P5QRZ2
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All DBs
Position
11:39832880..40222913
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AA seq
592 aa
AA seq
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MFGIQESIQRSGSSMKEEPLGSGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTAFVGFVEKEKEANSEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIVYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVNVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTML
VWSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRL
QKVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYSVPRNHN
QLPALANTSVHAGMMGVNSFSGQLAVNVSEASQATNQGFTRNSSSVSPHGYVPSTTPQQT
NYNSVTTSMNGYGSAAMSNLGGSPTFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSG
IFSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSTNGNSLQAISGMIVPPM
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggatccaggaaagcatccaacggagtggaagcagtatgaaggaagagccgctg
ggcagcggcatgaacgcggtgcggacgtggatgcagggcgccggggtgctggacgccaac
acagcggcgcagagcggggtgggtctggcccgggctcactttgagaagcagccgccttct
aacctgcggaaatccaacttcttccacttcgtcctggccctctacgacagacagggccag
cccgtggagattgagaggacggcctttgtggggttcgtggagaaggaaaaagaagccaac
agcgaaaagaccaataatggaatccactaccggctccagctcctctacagcaatgggata
cggacagaacaggatttctacgtgcgcctcatcgactccatgacaaaacaagccatagtg
tatgaaggccaagacaagaaccctgaaatgtgccgagtattgctcacacacgagatcatg
tgcagccgctgttgtgacaagaaaagctgtggcaaccgaaatgagactccctcagatcca
gtgataattgacagattcttcctgaagtttttccttaaatgcaaccaaaattgcctaaag
aatgcaggaaacccacgtgacatgcggagattccaggtcgtggtgtctaccacagtcaac
gtggatggccatgtcctggcagtctctgataacatgtttgtccacaataactccaagcac
gggcggagggctcggaggcttgacccctcggaaggtacgccctcttatctggaacatgca
gctactccctgtatcaaagccatcagcccgagtgaaggatggacgacgggaggcgcgact
gtgatcatcataggggacaatttctttgatgggttacaggtcatattcggtaccatgctg
gtctggagtgagttgataactcctcacgccatccgtgttcagacacctcctcggcacatc
cctggtgtggtggaagtcacactgtcgtacaagtccaagcagttctgcaaagggacacca
ggcagattcatctacacagcactcaatgaacccaccatcgactacggcttccagaggtta
cagaaggtcattcctcggcatcctggtgacccagagcgcttgccgaaggaagtgatcctt
aaaagagctgcagatctggttgaagccctgtacgggatgccccacaacaaccaggagatt
atcctgaagagagctgccgacattgcagaggctctgtacagtgtccctcggaaccacaac
cagctcccagcccttgctaacacttcggtccatgcagggatgatgggtgtgaactccttc
agtggacaactggctgtgaatgtctcggaggcatcacaagccaccaatcaaggtttcacc
cgcaactcaagcagcgtgtcaccacatggctatgtgccgagcaccaccccacagcaaacc
aactataactcagtcaccacaagcatgaacggctacggctcggccgccatgtccaatttg
ggcggctccccaaccttcctcaatggctcagctgccaactcaccctatgccattgtgcca
tccagccccaccatggcctcatctacaagcctcccctccaactgcagcagctcctccggc
atcttctccttctcaccagccaacatggtctcagcagtgaaacagaagagtgctttcgca
ccagttgtcagaccccagacgtccccacctcccacctgcaccagcaccaacgggaacagc
ctgcaagcgatatctggcatgattgtccctcccatgtga
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