Mus caroli (Ryukyu mouse): 110304427
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Entry
110304427 CDS
T05910
Symbol
Rnf43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110304427 (Rnf43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110304427 (Rnf43)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110304427 (Rnf43)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110304427 (Rnf43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
zf-RING_Vps41
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
110304427
NCBI-ProteinID:
XP_021031481
Ensembl:
MGP_CAROLIEiJ_G0016934
UniProt:
A0A6P5QEI1
LinkDB
All DBs
Position
11:82876477..82949286
Genome browser
AA seq
786 aa
AA seq
DB search
MSGGHQLQLAVLWPWLLMATLHAGFGHTGLVLAAAVESERSAEQKAIIRVIPLKMDPTGK
LNLTLEGVFAGVAEVTPAEGKLMQSHPLYLCNASDDDNLEPGFISIVKLESPRRAPRPCL
SLASKARMAGERGANAVLFDITEDRSAAEQLQQPLGLTKPVVLIWGSDAAKLMEFVYKNR
KAYVWIELKEPPAGANYDVWILLTVVGTVFVIILASVLRIRCRPHHSRPDPLQQRTARAI
SQLATRRYQPSCRRARAEWPDSGSSCSSSPVCAICLEEFSEGQELRVISCLHEFHRTCVD
PWLYQHRTCPLCMFNIVEGDSFSQAPAASPSYQEPGRRLHLIRQHPGHAHYHLPSAYLLG
PSRTSVARTTRPRPFLPSQEPSMGSRHQRLPRTSHLRAPEEQQHLAVSPHPYAQGWGLNR
LRCTSQHPAVCPVALRRARPHESSGSGESYCTERSGYLADGPASDSSSGPCHGSSSDSVV
NCTDISLQGIHGSSSTFRSSLSSDFDPLVYCSPEGDLQGKGIQPSVTSRPRSLDSVVPTG
ETQVSSHIHYHRHRHHHYKRQFRWHGRKPGPETGIPQSMPAASHTQLEPSLPDQQLITPN
PTASSMLPNPQRPRALTEPAPGLAEAASPSPSPSSNPNPSSLLNLQKSSLTVRHPHRKRR
GGPSEPLPTSLPPDLTVHTACPVFPHYSPSLAYPWPSEVHPLMFRPPGPDRRLLHEVPGP
CYSSSQPVWLYLNPRQPLGPCLPGEGHSKWTFNTAEDRRCPYSHCQVLPAQPGSEEELEE
LCEQAV
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtggccaccagctgcagctggctgtcctctggccctggctgctgatggcaacc
ctgcacgcaggcttcggacacacaggactggtgctggcggcggcagtggagtccgaaaga
tcagcagaacagaaagcgattatcagagtgatccccttgaaaatggaccccaccggaaaa
ctgaacctcactttggaaggcgtgtttgctggtgttgcagaagtgactccagcagaaggg
aagctaatgcagtctcaccccctgtacctgtgcaacgccagtgacgatgacaaccttgag
cctgggttcatcagcatcgtcaagctggagagccctcgacgagctcctcgcccctgcctg
tcactggccagtaaggcccgaatggctggtgagcgaggagccaacgcagtactctttgac
atcaccgaggatcgatcagctgctgagcagctgcagcagcccctggggctgacgaagcca
gtagtgctgatctggggtagtgatgccgcgaagctgatggagtttgtgtacaagaatagg
aaggcctatgtgtggattgagctgaaggagccccccgccggggcaaactatgacgtgtgg
atcctcctgaccgtggtgggaaccgtctttgtgatcatcctggcttcagtgctgcgcatc
aggtgccgcccccaccatagcagaccggatcctcttcagcagcggacagcccgggccatc
agccagttggccaccaggaggtaccaacccagttgtagacgagcccgagccgagtggcca
gactcaggaagtagctgcagctcgagccccgtgtgtgccatctgtctagaagagttctca
gaggggcaggagctccgggtcatttcgtgcctccacgagtttcatcgaacgtgtgtggac
ccctggctataccagcatcggacttgccccctctgcatgttcaacatcgtagagggagat
tcattttcacaggccccggcagcctctccatcttaccaggaaccaggcagaagactccac
ctcattcgccagcatcctggccacgcccactatcatcttccttctgcctatctgttgggc
ccttccaggacttcagtagcccggaccacaagacctagaccctttctgccctcccaggag
ccaagcatgggctctcggcatcagcgccttcccaggacttcacatctccgggctccagaa
gaacagcagcacttggcagtatctccgcacccctatgcacagggctgggggctgaatcgc
ctccgatgtacctctcagcatcccgcagtttgcccagtggccctacgacgggccaggcct
catgagagcagcgggtctggagaaagctactgtacagaacgcagcggttacttggcagat
gggccagccagtgactccagctcagggccctgtcatggctcatccagtgactcggtggtc
aactgcacagacatcagcctgcagggcatccatggcagcagctccaccttccgaagctcc
ctgagcagtgactttgaccccttggtatactgtagtcctgaaggggatctccaagggaaa
gggatacaacctagtgtgacctctcgaccccgctcgctggactcagtggtacccacggga
gagacccaggtttccagccacatacactatcaccgtcaccgccaccaccactacaaaagg
cagttccggtggcatggcaggaagcctggcccagaaactgggatcccacagtccatgcct
gctgcttctcacactcagctggagccatctctccctgaccagcagctcatcacacccaac
ccaacagcttcttcaatgcttcccaacccacaacggcccagggcccttacagagccagcc
cctggcctagcagaagctgccagccctagccccagtcccagctccaaccccaaccccagc
agtcttttgaacttgcagaaatccagcctcactgtcagacacccacacagaaaacggcgg
ggtggtccctcagaacccctgccaacctctctgcccccggacttgactgtgcacactgct
tgcccggttttcccccactacagtcccagtctggcatacccttggccctcagaggttcat
ccattgatgttcagacctccaggtccggataggaggctgctacatgaagtcccaggcccc
tgttactcaagttcacagccagtgtggttgtatctgaatccccgccagcctctgggacca
tgcttacctggagagggacattccaagtggacttttaacaccgcagaggacaggagatgt
ccttactcacactgccaggtgctgccagcccagcctggctcagaagaggagctggaggag
ttgtgcgagcaggctgtgtga
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integrated database retrieval system
