Mus caroli (Ryukyu mouse): 110304462
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Entry
110304462 CDS
T05910
Symbol
Nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03013
Nucleocytoplasmic transport
mcal05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110304462 (Nup85)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110304462 (Nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110304462 (Nup85)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110304462 (Nup85)
Messenger RNA biogenesis [BR:
mcal03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110304462 (Nup85)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110304462 (Nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_4
TPR_14
Motif
Other DBs
NCBI-GeneID:
110304462
NCBI-ProteinID:
XP_021031554
Ensembl:
MGP_CAROLIEiJ_G0017409
UniProt:
A0A6P5QN07
LinkDB
All DBs
Position
11:111409322..111425549
Genome browser
AA seq
656 aa
AA seq
DB search
MEELDCEPAVTWIPGVNSKKKQMCFDWGPGEMLLCETSFNQTDKSEKVPSCPFIYIIRKD
VDVYSQILRKLFNESHGIFVGLQKIEEELSGKSRKAQLVRVSKNYRSVIRACMEEMHQVA
IAAKDPASGRQFSSQVSILSAMELIWNLCEILFIEVAPAGPLLLHLLDWVRLHVCEVDSL
SADVLGSDNPSKHESFWNLVTVLVLQGRLDEARQMLAKEADANPSCAGMCRVLGDLMRTM
PILSPGNTQTLTELELKWQHWREECERHLQDNTFAANPRLESLCKIMLGDEAALLEQKEL
LSNWYHFLVTRLLYSNPTVKPIDLHFYAQSSLDMFLGGESSPEPLDNILMAAFEFDIHQV
IKECSIALSNWWFVAHLTDLLDHCRLLQSHNLYFGSNMREFLLLEYASGLFAHHSLWQLG
VDYFDYCPELGRVSLELHIERIPLNTEQKALKVLRICEQRQMTEQVRSICKILAMKAVRN
NRLGSALSWSIRAKDAAFATLVSDRFLRDYCERGCFSDLDLIDNLGSAMMLSDRLTFLGK
YREFHRLYGEKRFGDAASLLLSLMTSQIAPRSFWMTLLTDALPLLEQKQVIFSAEQTYEL
MRCLEDLASGRPECGEPDAQRLQDDDIETTKVEMLRLALARNLARAIIREGSLEGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctcgactgcgagcccgcagtaacttggattccaggtgtgaattccaagaag
aagcaaatgtgttttgactggggccccggcgagatgcttctctgtgaaacttccttcaac
caaacagacaaatcagagaaggtgccgagctgccctttcatctacatcatacggaaagat
gtggatgtttactctcaaattttgagaaaactcttcaatgaatcccatggaatctttgtt
ggcctgcaaaaaattgaggaagaactgtcggggaagtccaggaaagctcaattggttcga
gtgagtaaaaattaccgttcagtcatacgggcctgtatggaagaaatgcatcaggttgca
attgctgctaaagatccagccagtggccggcagttcagcagccaggtctccattttgtca
gccatggagctcatttggaacctgtgtgagattctttttattgaagtagcaccagctggc
cctctcctccttcatcttcttgactgggtccgactgcacgtgtgcgaggtggacagtttg
tcagcagatgtcctgggcagtgacaacccaagcaagcatgaaagcttctggaacttggtg
actgtcctggtgcttcagggccggctcgatgaggcacggcagatgctagccaaagaagct
gatgccaacccctcttgtgcaggcatgtgccgtgtccttggggacctgatgaggacaatg
cccattctcagccctggcaacactcagacactgacagagttggagctgaagtggcagcac
tggcgtgaggagtgtgaaagacacttgcaagacaacacatttgcagccaacccccgtctg
gagtctctctgcaagatcatgctgggcgatgaggccgccttgttggagcagaaggagctt
ctgagcaactggtaccatttcttagtgacgaggctgctgtactctaaccccacagtgaag
cccattgacctgcacttctatgcccagtccagcctagacatgtttcttggaggcgagagc
agtccagaaccactggacaacatcttgatggcggcctttgagttcgacattcaccaggtg
atcaaagagtgcagcatcgccctgagcaactggtggttcgtagctcacctcacagacctt
ttggatcactgcagactcctccagtcacacaatctctattttggttctaacatgagagaa
ttcctcctgctggagtacgcctcaggactgtttgctcaccacagcctgtggcagctgggg
gtggactactttgattactgcccagagctaggccgagtttccttggagctgcacattgag
cggattcctctcaacacagagcagaaagccttgaaggtgctgaggatttgtgagcagcgg
cagatgactgaacaagtgagaagcatctgtaagatcttggccatgaaggctgttcgtaat
aaccgcttgggctcagcactctcctggagcatccgcgccaaagatgctgcctttgccaca
ctcgtatctgacagattcctccgggattactgtgagagaggctgcttttctgacttggat
ctcattgacaatctgggatcagccatgatgctcagtgatcgactgacatttctgggaaag
taccgggagttccacagactgtacggggagaagcgctttggtgacgctgcttctcttctg
ctgtccctcatgacctctcagattgcacctcgttctttctggatgactctgctcacagat
gcccttcctcttttggaacagaaacaggtgattttttcagcagagcagacatatgagctg
atgcggtgcctggaagacttggcctcagggaggccagagtgtggtgaacctgatgcccag
cgactgcaggatgacgacatagagaccaccaaggtggagatgctgagactggctcttgcc
cggaatcttgctcgggcaattataagggaaggctcactggagggttcctga
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