Mus caroli (Ryukyu mouse): 110304545
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Entry
110304545 CDS
T05910
Name
(RefSeq) ATP-binding cassette sub-family A member 8-A isoform X1
KO
K05650
ATP-binding cassette, subfamily A (ABC1), member 8
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110304545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mcal02000
]
110304545
Transporters [BR:
mcal02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
110304545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
MMR_HSR1
nSTAND_NTPase5
AAA_23
Rad17
nSTAND1
URGCP_GTPase
Motif
Other DBs
NCBI-GeneID:
110304545
NCBI-ProteinID:
XP_021031603
Ensembl:
MGP_CAROLIEiJ_G0017356
UniProt:
A0A6P7RVW9
LinkDB
All DBs
Position
11:complement(105900602..105975535)
Genome browser
AA seq
1619 aa
AA seq
DB search
MVKREINVCQQTWALLCKNLLRKKRLKRDTFLEFLYTALILLSLTLFLQLHEVYDFSSLP
DVDLGRIDSFNDSTFMIVYTPITPTTQRIMDRVSLVSYMTGRKILASPNEENMTELISMR
FSDVVGVIFTNAYSYNLKFIKGARIPTIKEHQDHTAHCHSYGEIISCGLSEFWRDGFVAL
QAAINAAIIEVTTNHSVMEEMMSLTGKYIKIDSFVGQEGTTTDCFLFFCIICFSPLTYYI
SAGVTRERKKMKGLMAVMGLRDSAFWLSWGLLYGVIVFVVTLLLTTIVKLVQFVFLTGFM
VIFSLFFFYGLSLISLSFLMSVLLKKSFLTDLVVFLLTVSCGSLGFTALYRYLPVSLEWL
LSLLSPFAFMLGMVQLLRLDYDVNSNADPMGNPNEVIGTIFMLFFDGVFYLLLTFYFEKV
LPSEYGRRHPPLFFLKSSFWSGQNPANQTALDNETDYAFSDHSFEPVSTEFHGKEAIRIR
NLTKDYIQKSKRTEALKDLTLDVYKGQITAILGHSGAGKSTLLNVLSGLCVPTKGWVTIH
NNKLSEMTDLENISKLTGVCPQCNVQFDFLTVRENLRLFAKIKGIQAHEVDNEVQRVLLE
LDMKNTQNILVQNLSGGQKRKLTFGIAILGDPQIFLLDEPTAGLDPFSRHRVWNLLKERR
ADRVVLFSTQFMDEADILADRKVFISKGKLKCAGSSLFLKKKWGIGYHLSLQLSETCVHE
RITSLVKQHIPDSKLSAESEGKLSYILPLERTNKFPDLYRDLERCPDLGIENYGVSITTL
TEVFLKLEGKSSIDQSDIGMTEDVQAGGARSPERFAEVEQLVSLLNGRCKMKGGMALWWQ
QLCAVTRLRFLKLKHERKSIVILILILGIGLLHILSANIYRMVRQSDYCWELAPHMYFLT
PGQQPQLPLTNLLIVNKTGAKIDDFIHSLEQQNIALEVDAFGTRNGTEDSQYNGAIILSG
DEKNYNFTLACNTKRLNCFPVLVDIVSNGLLGLFAPSAHIQTDRSTFPEENDHRNFDYVA
YFFSWVLLMACVPPYISMTSIDDYKNRAQFQLWISGLSPSAYWFGQALFEVPVYCALILS
IFIAFYASAPPESKFTVGDLFIQSLYVGGYAMSIIFMTYVISFIYRKGRKNSGLWSLCFY
IVSFFSMCFMLIDYFRDTSLFGFIALVPPATLGGCTLLHFENREFSEIIYEPEREYSYLF
FLAPLLHFAIFVVILRCMERKFGMKTMRMDPVFRISPRSNRVFNNPEDPEGEDEDVSQER
VWTANALTSTDFQEKPAIIASCLRKEYKGKKKCFVLKSKKKIATRNISFCVRKGEVVGLL
GHNGAGKSTSIKMITGETKPSAGQVLLKGSSTGDTPGFLGYCPQENALWLNLTVREHLEI
FAAIKGMRKSDANVAIERLADALKLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSVVLLD
EPSTGMDPEGQQQMWQAIQATFANTERGALLTTHYMAEAEAVCDRVAIIVSGRLRCIGSI
QHLKSKFGKEYLLEMKVKTPSQVEPLNSEIMRLFPQAARQERYSSLMVYKLPREDVQPLS
QAFFKLETVKQSFDLEEYSLSQSTLEQVFLELSKEQELDGFEEELDPSVKWKLLPQEEA
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atggttaagagagagataaatgtgtgccaacaaacgtgggccttattgtgcaagaatctt
ctcagaaaaaagagactgaaaagagacacatttttggaattcctgtacacagcacttata
ctacttagtttaactttatttcttcaattgcatgaagtttatgatttttcgtcactgcct
gatgtggacctgggacgcattgattcatttaatgactccacctttatgattgtgtacaca
cctatcaccccaacaactcagaggataatggatagagtctctttggtctcttacatgaca
ggaagaaaaatattggcttctccaaatgaagaaaatatgacagaactcatttcaatgcgt
ttcagtgatgtagtgggggtcatattcaccaatgcttactcctacaacttgaagttcata
aaaggtgcaaggatccccaccataaaggagcatcaggaccacacagctcattgtcattcc
tatggagagatcatttcttgtggcctttcagaattctggagagatgggtttgtggctctt
caagctgccattaatgccgccatcatagaagtcacaacaaatcactcagtgatggaagag
atgatgtcacttaccggaaaatacatcaagatagattctttcgttgggcaagaagggaca
acgacggactgtttcctttttttctgtatcatttgtttctccccacttacctattatatc
tcagctggtgttacaagagaaaggaaaaagatgaagggcttgatggcagtgatgggcctt
cgggattcagcattctggctgtcctggggtttgctctatggtgtcattgtcttcgttgtg
acccttctcttgacaactattgtaaaactggtccaatttgtctttttgactggatttatg
gtgatcttcagtctctttttcttctatggcttatctctgatctctttgtctttcttgatg
agtgtcttactaaagaagtcttttctcactgacctggtggtgttcttgctcactgtttcc
tgtggaagtcttgggttcacagcactgtacagataccttcctgtatccttggagtggctt
ctaagtttgctcagtccctttgcttttatgcttggaatggtccagctcttacgtttagat
tatgatgtgaattcaaatgcagaccccatgggcaaccccaatgaagtcattggcacaatc
ttcatgctgttctttgatggtgtcttctacctgctcttaacattctactttgagaaggtt
ttaccaagtgaatatggacgtcgacacccacccttgtttttcctgaagtcctcattttgg
tcaggacaaaatccagccaatcagactgcccttgacaatgaaacagactatgcgttttct
gatcactcttttgaacccgtgtctacagaattccatgggaaggaagccatcagaatcaga
aatcttacaaaagactacatacaaaagtctaagcgcacagaagctttgaaagatctgaca
ctggatgtatataaaggccagattactgcgatccttggtcacagtggagctgggaaatca
acactgttaaatgtcctgagtgggttgtgtgttcccaccaaaggttgggtcactatccat
aataacaaactctcagaaatgactgacttggaaaatatcagcaagctcactggagtttgt
ccacaatgcaatgtgcaatttgacttcctcactgtaagagaaaatcttaggctatttgct
aaaataaaagggattcaagcccacgaagtggataacgaggtacaaagagttttgctggaa
ttggacatgaaaaatactcagaatattcttgttcaaaacctaagtggcggacagaagaga
aagctgacgtttggaatcgccattttaggagaccctcagattttcctactggatgagccc
accgctggcctggatcccttttcaaggcaccgggtatggaatcttctgaaggagcgcaga
gcagaccgtgtggtcctcttcagcacgcagttcatggatgaggctgacatcctggctgat
aggaaagtgttcatctccaaggggaagctgaagtgtgcaggatcttctttgtttctgaag
aagaaatgggggattggttatcacttaagcttgcagctgagcgaaacgtgtgtgcatgaa
agaataacatcacttgtcaaacagcacatccccgattccaagttgtcagcagaaagcgaa
gggaaactgagctacatattacccctggaaagaacaaacaagtttccagatctttatagg
gatctcgagagatgtccagacctgggaattgagaactatggcgtttctataacaacactg
actgaggtctttctgaaactggaaggaaaatcatctattgaccagtcagatattggtatg
acagaagatgtacaagctggaggggcaaggagcccagagaggtttgctgaagtagaacaa
cttgtctctttacttaatgggagatgtaagatgaaggggggcatggctctctggtggcag
caactctgtgcagtgaccaggcttcgcttcttgaagttaaagcatgaaaggaaatccatc
gttattctgattctgattttggggattggacttctgcatattttgtcagcaaatatttac
aggatggtccgtcaaagtgactactgttgggagcttgcccctcatatgtacttcctcaca
ccaggccagcaaccacagctgcccctcacgaacttactgatcgtcaacaaaacaggagca
aagatcgatgactttatacattcactggaacaacagaacatagctttggaagttgatgcc
tttgggactagaaatggcaccgaggacagtcagtataatggagctatcatcctatcaggt
gatgagaagaattacaactttaccctggcatgcaacaccaagaggctgaattgttttccg
gttctggtggatattgtgagtaatgggctacttggactgttcgcaccatcagcacacatt
caaactgaccgcagcacatttcctgaggaaaacgaccaccgaaattttgattatgtggct
tatttcttctcgtgggtacttctgatggcctgtgttcctccttatatttccatgaccagc
attgatgactataagaacagagctcagttccagctgtggatttcagggctctccccatct
gcatactggttcgggcaggctctgtttgaggttccagtgtactgtgcactcattttgtct
atattcattgcattctatgcctccgcccctccagagagtaagttcacagttggagatctg
tttattcagagtctctatgttggtggctatgccatgtcaattattttcatgacttatgtg
atttcgttcatttatcgcaaggggagaaaaaatagtggcctttggtcactttgcttctat
attgtctctttcttctctatgtgttttatgcttattgattactttagagatacctcactg
tttggttttattgccctggttccacctgctacattgggaggctgtacattattacatttt
gagaaccgtgaattttctgaaataatttatgaaccagaaagggagtattcctatctgttt
ttcctagctcctcttcttcattttgccatcttcgtagttattctccgatgtatggaaagg
aagtttggaatgaaaacaatgagaatggatcctgtctttagaatttctccaagaagcaat
cgtgtatttaacaatccagaagacccagaaggggaagatgaagatgtgagtcaggaaaga
gtgtggacagcaaatgctttgacttccactgacttccaggagaagccagccatcattgcc
agctgccttcgcaaggagtacaaaggaaagaagaaatgctttgttctgaagagcaagaag
aagatcgccacaagaaacatctctttttgcgttcgaaaaggtgaggttgtaggattactg
ggacacaatggagccggtaaaagtacatccattaagatgataactggagaaaccaagcca
agcgccggacaggtgctgctgaaggggagcagcacaggggacaccccggggttcctgggg
tactgtcctcaggaaaacgctctgtggctcaacctgacggtgagggaacacctggagata
tttgcagccataaaggggatgagaaaaagtgatgcgaacgtggccatcgaaaggttggca
gatgcgctcaagctgcaggaccagctgaagtctcctgtgaagacactgtcagagggagtg
aagagaaagctgtgcttcgtgctgagcatcctggggaacccttctgtggtacttctggat
gagccatccaccgggatggaccccgaggggcaacagcaaatgtggcaggctatccaggcc
acctttgcaaacacagaacggggcgccctcctgaccacccattacatggcagaggctgag
gctgtgtgtgaccgcgtggccatcatagtgtctgggaggctgagatgtattggatccatc
caacatctgaagagcaaattcggcaaagaatatctcctggagatgaaggtgaagaccccc
tcgcaggtggagcccttgaactcggagatcatgaggctgttcccacaagctgctcggcag
gaaaggtactcttctctgatggtctataaactgcccagggaagatgtgcaacctttatcc
caggccttcttcaaattagagacagttaaacagagctttgacctggaggagtacagcctt
tcacagtccaccctggagcaggtcttcctggagctctctaaggagcaggagctggacggt
tttgaagaggaacttgatccctcagtcaagtggaagctcctcccacaggaagaggcttaa
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