Mus caroli (Ryukyu mouse): 110304638
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Entry
110304638 CDS
T05910
Symbol
Snap47
Name
(RefSeq) synaptosomal-associated protein 47
KO
K18212
synaptosomal-associated protein 47
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110304638 (Snap47)
Membrane trafficking [BR:
mcal04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-47
110304638 (Snap47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAM
IRS
KxDL
Motif
Other DBs
NCBI-GeneID:
110304638
NCBI-ProteinID:
XP_021031741
Ensembl:
MGP_CAROLIEiJ_G0016435
UniProt:
A0A6P5QLH0
LinkDB
All DBs
Position
11:complement(54223905..54266971)
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AA seq
411 aa
AA seq
DB search
MSSDMRVHSWSCSYYLDLEKQWVPGKLTLTPHSLKFIVEKTEEVLVGLPLSSIIEIRKES
SLFIFGAITVLEKSQTKHWFSSLQPSRNVVFNVIEHFWRELLLSQPGTPGSTPSHVTRGQ
ELMGLMANSQKRMEDTAKDLQQQTEQLDSVLKGLEKMESDLDVADRLLTELETPSWWPFG
SKFWKMPAEENLKEGVSSTCESFGKEGVVITVPAIVSERAESHSKLGKLTVLISALEIYD
SCSLLLHRFEKEDVDDIKVHSPYEVSIRQRFIGKPDVAYQLISAKMPEVIPILEVQFSNK
IELLEDALVLRNKVFASSAERHAASRPKGCAPHRELPTGGQEGEQLQKNLPLLSEGEAQE
LTQILSKMKGLALDTEAELERQDAALDGITVAVDRATLNVDKQNRRMRKLM
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgagttctgatatgcgtgtccactcctggtcttgttcctactatctggaccttgagaag
caatgggttcctggaaaactgaccctgacacctcattcactgaagttcattgtggaaaaa
acagaagaggtccttgttggcctgcccctctccagcatcattgagatcaggaaagagtca
tctctctttatcttcggtgcgatcacagtcctggagaagagccagaccaagcactggttc
agctcactgcagcctagtcgaaatgtggtcttcaatgtcatcgaacatttctggagggag
ctgctactgtcccagccaggcactcctggcagcacaccctcccatgtgaccaggggacag
gagctgatgggactgatggcaaattcccagaaacgcatggaagacacagcgaaggatctc
cagcagcagaccgagcagctggacagcgtcctgaagggcctggagaagatggagtctgac
ctggacgtggccgacagattgctgacagaattggagacaccttcctggtggccttttggc
tctaagttttggaagatgccggcagaagaaaatctcaaggaaggtgtgtcttccacttgt
gagtcctttggaaaggaaggggttgtgatcacggtccctgctattgtttctgagagagca
gagtctcactccaagctgggaaagctcactgtcctgatctccgctctggaaatctatgac
tcctgctcgttgctcctgcacagatttgagaaggaagacgttgatgatatcaaggttcac
tctccttatgaagtcagcatacgccagcgcttcattgggaagccagacgtggcttaccag
ctgatatctgccaagatgccagaggttattcccattttagaagtgcagttcagcaacaag
attgagctcctggaagatgccttagtgctcaggaacaaggtctttgcttcctctgcagag
aggcatgcagcatccagaccgaagggctgcgctccacaccgagagctgcccacaggagga
caggaaggcgagcagctgcagaagaacttgccactgctctctgagggggaagcccaggag
ctgacacagatcctgagcaaaatgaagggactcgcactggacactgaggcagagctggaa
cgccaggatgcggctctggatggcatcaccgtagctgtggaccgggcaaccctgaatgtg
gacaagcaaaaccggcgtatgagaaagctgatgtag
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