Mus caroli (Ryukyu mouse): 110304645
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Entry
110304645 CDS
T05910
Symbol
Sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04517
IgSF CAM signaling
mcal04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110304645 (Sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110304645 (Sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110304645 (Sptbn1)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110304645 (Sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
110304645 (Sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
110304645
NCBI-ProteinID:
XP_021031753
Ensembl:
MGP_CAROLIEiJ_G0016163
UniProt:
A0A6P7RE78
LinkDB
All DBs
Position
11:complement(25693611..25860944)
Genome browser
AA seq
2363 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVARELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEKI
LSSDDYGKDLTSVMRLLSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERII
YIREQWANLEQLSAIRKQRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEITNYRPTIDTLHEQASALPQAHAESPEVKGRLAGIEERCKEMAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHNGHPSEKEIRAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEISDVWEEMKTTLKNREASLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQQFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDRIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLDKIEKEGMQLISEKPETEAVVKEKLTGLHKMWEVLESTTQTKAQRLFDAN
KAELFTQSCADLDKWLHGLESQIQSDDYGKDLTSVNILLKKQQMLENQMEVRKKEIEELQ
SQAQALSQEGKSTDEVDSKRLTVQTKFMELLEPLSERKHNLLASKEIHQFNRDVEDEILW
VGERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITDSSSLNA
EAIRQRLADLKQLWGLLIEETEKRHRRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEK
AKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRALVADSHPESERISMRQSKVDKLY
AGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERF
REFARDTGNIGQERVDTVNSMADDLINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQI
LAASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQV
RQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACEGRRVRLVDTGDKFRFFSMV
RDLMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLAR
KHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYL
SSREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRRP
PSPDPNTKVSEEAESQQWDTSKGDQVSQNGLPAEQGSPRMAGTMETSEMVNGAAEQRTSS
KESSPVPSPTSDRKAKSALPAQSAATLPARTLETPAAQMEGFLNRKHEWEAHNKKASSRS
WHNVYCVINNQEMGFYKDAKSAASGIPYHSEVPVSLKEAICEVALDYKKKKHVFKLRLSD
GNEYLFQAKDDEEMNTWIQAISSAISSDKHDTSASTQSTPASSRAQTLPTSVVTITSESS
PGKREKDKEKDKEKRFSLFGKKK
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacggtagccacagactatgacaacattgagatccagcagcagtacagcgat
gtgaacaaccgttgggatgtggatgactgggacaatgagaacagctctgcaaggctcttt
gagcgctcccgcatcaaggccctggcagatgagcgtgaagctgtacagaagaagaccttc
accaagtgggtcaattcccaccttgcgagagtgtcctgccgaatcacagacctgtacacg
gaccttcgagatggacggatgctcatcaagctactggaggtcctctctggagagaggctg
cctaaacccactaagggacggatgcggatccactgtctggagaatgttgacaaggctctt
caattcctgaaagagcagagagtccatcttgagaacatgggctcccatgacattgtggat
ggaaaccaccggctaaccctcggcctcatctggactattattctgcgcttccagatccag
gatattagtgtggagactgaagataacaaagagaaaaagtctgctaaggatgcattgctc
ctgtggtgccagatgaagacagctgggtaccccaatgtcaacattcacaatttcaccact
agctggagggatggcatggccttcaatgcactgatacataaacaccggcctgacctgata
gattttgataaactgaagaagtctaatgcacactacaatctgcagaacgcatttaacctg
gcagagcagcaccttggcctcactaaactgttagaccccgaagacatcagtgtggaccac
cctgatgagaagtctatcatcacatacgtggtgacttactaccactacttctccaagatg
aaggccttggctgtggaaggaaagcgcattggaaaggtgctcgataatgctatagaaaca
gagaaaatgattgagaagtacgagtcacttgcctctgaccttctggagtggattgaacaa
accatcatcatcctaaacaaccgcaaatttgctaattcactggttggggtccagcagcag
cttcaagcattcaacacgtaccgcacagtggagaaaccacctaagtttactgagaagggg
aatttggaggtgctgcttttcacaattcagagcaagatgcgagcgaataatcagaaggtc
tacatgccccgagaagggaagctcatctctgatatcaacaaggcctgggaaagactggaa
aaagcagaacatgagagagaactggctctgcggaatgagctcatacggcaggaaaaactg
gaacaactcgcccgcagatttgatcgcaaggcagctatgagggagacatggctgagcgaa
aaccagcgtcttgtgtctcaggacaactttggatttgaccttcccgctgttgaggctgct
accaaaaaacacgaggccattgagacagacatcgctgcatatgaagaacgagttcaggct
gtggtggccgtggccagggagcttgaagctgagaactaccatgacatcaagcgcatcact
gcaaggaaggacaatgtcatccggctctgggaatacttgctggaactgctcagggccagg
aggcagcgtcttgagatgaacctgggattgcaaaagatattccaggaaatgctttatatt
atggactggatggatgaaatgaaggtgctattgctgtctcaagactatggcaaacactta
cttggtgttgaagacctgttacagaagcatgccctggtggaagcagacattgcaatccaa
gcagagcgtgtaagaggcgtgaatgcctctgcccagaagtttgcaacagatggggaaggc
tacaagccatgtgacccccaggtaattcgagaccgtgttgcccacatggagttctgctat
caagagctttgtcagctggctgccgagcgtagggctcgcctggaagagtcccgtcgcctc
tggaagttcttctgggagatggcagaagaggaaggctggatacgagagaaggagaagatc
ctgtcctctgatgattacgggaaagacttgaccagtgtcatgcgcctgctgagcaagcac
cgggcatttgaggatgagatgagtggccgtagtggccattttgagcaggccattaaagaa
ggtgaagacatgattgcagaggaacactttggatcggaaaagatccgtgagagaatcatt
tatatccgggagcagtgggccaacctggagcagctctcagccattaggaagcagcgccta
gaggaagcctcattactgcaccagttccaggctgatgctgatgatattgatgcttggatg
ttagatatactcaagattgtctccagcaatgatgtgggccatgatgagtactccacgcag
tctctggtcaagaagcataaagatgtagcagaagagatcaccaactacaggcccactatt
gacacactgcatgagcaagccagtgcccttccacaagcacatgcagagtctccagaagtg
aagggccggctggcaggaattgaggagcgctgcaaggagatggcagagttaacacggcta
aggaagcaggctctgcaggacaccctggccctatacaagatgttcagtgaggctgatgcc
tgtgagctctggattgacgagaaggagcagtggctcaacaacatgcagatcccagagaag
ctggaggacctggaagtcatccagcacagatttgagagcctggaaccagaaatgaacaac
caggcttcccgggttgctgtggtgaaccagattgcacggcagctgatgcacaatggccac
cccagtgaaaaggaaatcagagctcagcaagacaaactcaacacgaggtggagtcagttc
agagaactggtggacaggaaaaaggatgctcttctgtctgccctgagcatccagaactac
cacctcgagtgcaatgaaaccaaatcctggatccgggaaaagaccaaggtcatcgagtct
acccaagaccttggcaatgacctggcaggtgtcatggccctgcagcgcaagctgactggc
atggagcgagacttggtagccattgaggcgaagctgagtgacctgcagaaagaagctgag
aagctggagtccgagcaccctgaccaggctcaagctatcctgtctcggctggccgagatc
agtgatgtgtgggaggaaatgaagacaaccctgaagaaccgagaggcctccctgggagag
gccagcaagctgcagcagtttctgcgggacttggacgacttccagtcttggctctccagg
acccagactgctatcgcctcagaggacatgcccaacaccctgactgaggcagagaagctt
ctcacacagcacgagaatatcaaaaatgagattgacaattacgaggaagactaccagaag
atgcgggacatgggcgagatggtcacccagggacagactgatgcccagtacatgtttctg
cggcagcggctgcaggccttggacactggctggaatgagctccacaaaatgtgggagaac
aggcaaaacctcctctcccagtcccatgcctaccagcagttccttagggacaccaaacaa
gctgaagcttttcttaataaccaggagtatgttttggctcatactgaaatgcccaccacc
ctggaaggagctgaagcagccattaaaaagcaggaggacttcatgaccaccatggatgcc
aacgaagagaagatcaatgctgttgtggagactggccgaagactggtgagcgatgggaac
atcaactccgaccgcatccaggagaaggtggactctattgacgacagacacaggaagaat
cgagaagcagccagtgaacttttgatgaggttaaaggacaaccgtgacctacagaagttc
ctgcaagattgtcaagagctgtccctctggatcaatgaaaagatgcttacagctcaagac
atgtcttatgatgaagccagaaatctgcacagtaaatggttaaagcatcaagcatttatg
gcagaacttgcatccaacaaagaatggcttgacaaaattgagaaggaaggaatgcagctt
atttcagaaaagccagaaacagaagctgtggtaaaggaaaaactcactgggttacataaa
atgtgggaagtccttgaatccacaacccagaccaaggcccagcggctctttgatgcaaac
aaggctgagcttttcacacaaagctgcgcagatcttgacaaatggctacatggcctggag
agccagattcaatctgacgactatggcaaagaccttaccagtgtcaatattctgctgaaa
aagcagcagatgctggagaatcagatggaagttcggaagaaggagatcgaggaactgcag
agccaagcccaggcgctgagtcaggaggggaagagcacagatgaggtggacagcaaacgc
cttactgtgcagaccaagttcatggagcttctcgagcccttgagcgagaggaagcataac
ctgctagcttccaaggagatccatcagttcaacagggatgtggaggacgaaatcctgtgg
gttggcgagaggatgcctttggcaacttccacagatcatggccataaccttcaaactgtg
cagctgttaataaagaaaaaccagaccctccagaaagaaatccagggacaccagcctcgt
attgatgacatctttgagaggagtcaaaacatcatcacagatagcagcagcctcaatgcc
gaggctatcaggcagaggctcgctgacctgaagcagctgtgggggctcctcattgaggaa
actgagaaacgccatagacggctcgaggaggcgcacaaggcgcagcagtactactttgat
gcagctgaagcagaggcgtggatgagtgaacaggagttgtacatgatgtctgaggaaaag
gccaaggatgagcagagtgctgtctctatgttgaaaaagcaccagattttagaacaagct
gttgaggactacgcagagacagtacaccagctctccaagactagccgggcgctggtggct
gacagccatcccgaaagtgagcgtattagcatgcggcagtcaaaggtcgacaagctgtat
gctggcctgaaggaccttgctgaggagaggagaggaaaacttgatgagaggcacaggctg
ttccagctcaacagagaggtagatgacctggaacagtggatcgctgagagggaagtggtc
gcaggctcccatgagttgggacaggactatgagcatgtcacgatgttacaagaacggttc
cgggaatttgctcgggacacaggaaacattgggcaagagcgtgtggatacagttaatagc
atggcagatgacctcatcaactctggacattcagatgctgccaccattgctgagtggaaa
gatggtctcaatgaagcctgggccgacctcctggagctcattgacacaagaacacagatt
cttgctgcctcgtatgaacttcataagttttaccatgatgccaaggagatctttggccga
atccaggacaaacacaagaaactccctgaggagcttggaagagatcaaaacactgtggaa
actttacagagaatgcacaccacctttgagcatgacatccaagctctgggcactcaggtg
aggcagctgcaggaggatgcagctcgcctccaggcagcctatgcaggggacaaggctgat
gacatccagaagcgtgagaatgaggtcctggaagcctggaagtccctgctggatgcttgt
gagggtcgcagggtgcggctggtagacacaggagacaagttccgcttcttcagcatggtg
cgtgacctcatgctctggatggaagatgtcatccggcagatcgaggcccaggagaaacca
cgggatgtgtcatctgttgaactgttaatgaataatcatcaaggtatcaaagctgaaatt
gatgctcgtaatgacagctttacagcctgcattgaacttgggaaatccctgctggcacgg
aaacactatgcttctgaggagatcaaggaaaagttactgcagctgacggagaaaagaaaa
gaaatgattgacaagtgggaagaccggtgggagtggttaagactgattttggaggtccat
cagttctcaagggatgccagtgtggcagaggcttggctgcttggacaggaaccataccta
tccagccgtgaaattggccagagtgtagacgaagtggagaagcttattaagcgccatgag
gcgtttgaaaagtctgcagcgacctgggatgagagattctctgctctggaaaggctgaca
acgttggagctactggaagtgcgcagacagcaagaggaagaagaaagaaagaggcggcca
ccttctccggacccaaacacgaaggtttcagaggaggctgagtcccagcaatgggatact
tcaaaaggagaccaagtttcccagaatggtttgccggctgagcagggatctccacggatg
gcaggaaccatggaaacgagtgaaatggtcaacggtgctgctgagcagaggacaagctcc
aaagagtccagtcctgttccctctcccacctcggaccgaaaggccaaatctgcacttcca
gcccagagtgctgccaccctgccagccaggaccctggagacgcccgctgcccagatggaa
ggcttcctcaatcggaagcatgagtgggaggcccacaataagaaagcctcgagcaggtcc
tggcacaatgtatattgtgtcataaataaccaagaaatgggcttctataaagatgccaag
agtgctgcttctggcatcccctaccacagtgaggtccctgtgagtttgaaagaggccatc
tgcgaagtggcccttgattacaagaagaagaagcacgtgttcaagctaagactaagtgat
ggaaacgagtacctcttccaagccaaagatgatgaggaaatgaacacatggattcaggct
atctcctctgccatctcctctgacaaacacgacacatctgccagcacccagagtacgcca
gcatccagtcgggcgcagaccttacccaccagcgtcgtcaccatcaccagcgagtccagt
cctggcaagagggagaaggataaagagaaagacaaagagaagaggttcagcctttttggc
aagaagaagtga
DBGET
integrated database retrieval system
