Mus caroli (Ryukyu mouse): 110304653
Help
Entry
110304653 CDS
T05910
Symbol
Ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mcal03009
]
110304653 (Ddx56)
Enzymes [BR:
mcal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110304653 (Ddx56)
Ribosome biogenesis [BR:
mcal03009
]
Eukaryotic type
Pre-60S particles
Helicases
110304653 (Ddx56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
110304653
NCBI-ProteinID:
XP_021031764
Ensembl:
MGP_CAROLIEiJ_G0016069
UniProt:
A0A6P5QNE3
LinkDB
All DBs
Position
11:complement(3115897..3125162)
Genome browser
AA seq
546 aa
AA seq
DB search
MEDQEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAA
YAIPMLQSLLHKKATGPVMEQAVRGLVLVPTKELARQAQAMIQQLAAYCARDVRVANVSA
AEDSASQRAVLMEKPDVVVGTPSRVLSHLQQNSLKLRDSLELLVVDEADLLFSFGFEDEL
KSLLCHLPRIYQAFLMSATFNDDVQTLKELVLHNPVTLKLQESQLPGPDQLQQFQVVCET
EEDKFLLLYALLKLSLIRGKALLFVNTLERGYRLRLFLEQFSIPSCVLNGELPLRSRCHI
ISQFNQGLYDCVIATDAEILGSQVKGKRRGRGSKGDKASDPESGVARGIDFHHVSAVLNF
DLPPTAEAYVHRAGRTARANNPGIVLTFVLPAEQPSLGKIEDLLSGEGEAPILLPYQFQM
EEIENFRYRCRDAMRSVTKQAIREARLKEIKEELLHSEKLKTYFEDNPRDLQLLRHDLPL
HPAVVKPHLGHVPDYLVPAALRGLVHPRKKRRKMPFSKKAKKVKAQNPLRDFKHRGKKTK
PAAKPS
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccaagaagcgctgggttttgaacacatgggcctggatccccggctcctgcag
gctgtcaccgatttgggctggtcgcgacctacgttgatccaggaaaaggccattcctctg
gcgctggaggggaaggacctcctggcccgcgcccgcacaggctccgggaagaccgcagct
tatgctattccgatgcttcagtcgcttctccacaagaaggcgacaggtcctgtaatggag
caggctgtgagaggccttgttcttgttcctaccaaggagctggcacggcaggcccaggcc
atgatccagcaactggctgcctactgtgctcgggacgtgcgagtggctaatgtctcagct
gcggaagactcggcttctcagagagctgtgttgatggagaagccagatgtggtggtggga
accccatcccgagtattaagccacttgcagcagaacagcttgaaactccgggactcccta
gagctgctggtggtagatgaagctgaccttcttttttcctttggctttgaggatgaactc
aagagtcttctctgtcacttgcctcggatttaccaggctttcctcatgtcggccactttc
aatgacgacgtacagactctgaaggagctggtactgcataacccggttaccctcaagtta
caggagtcccagctgccggggccagaccagctccagcaatttcaggtggtctgtgagaca
gaagaagacaagttcttgctgctgtatgccctgctcaagctgtcactgattcggggcaaa
gccttgctctttgtcaatactctagagaggggttaccggctccgtcttttcctggaacag
ttcagcattccttcctgcgtgctcaacggagaactcccactgcgctccaggtgccacatc
atctcacagttcaaccaaggcttgtatgattgcgtcatagcgacagatgctgaaatctta
ggatcccaagtcaaaggcaaacgtcgagggcgcgggtccaaaggagacaaggcctctgat
ccagagtcaggtgtggcccggggcatagacttccaccacgtgtctgcggtcctcaatttt
gaccttcctcccaccgcagaggcctatgtccatcgagctggcaggacagctcgagccaac
aacccaggcatagttctgacctttgtgttgcccgcggaacagccttccttggggaagatt
gaggaccttttgagtggagagggcgaggcccccatcctgcttccataccagttccagatg
gaggagattgaaaactttcgctatcgctgcagggatgccatgcgctcagtgaccaagcag
gccattcgagaggcaagactgaaggagatcaaggaggagcttctacactcagagaagctc
aagacatactttgaggacaaccccagagaccttcaactacttcgtcatgatctgcccttg
cacccggcagtggtgaaacctcatttgggccatgtccctgactatttggttcctgctgct
cttcgtggccttgtgcatcctcgaaagaaacggagaaagatgcccttctctaagaaggct
aagaaggtgaaggcccagaacccactgcgtgactttaagcacaggggaaagaaaactaag
cccgcagcaaagccttcttga
DBGET
integrated database retrieval system
