Mus caroli (Ryukyu mouse): 110304811
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Entry
110304811 CDS
T05910
Symbol
Sox9
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04024
cAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
110304811 (Sox9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110304811 (Sox9)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110304811 (Sox9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110304811
NCBI-ProteinID:
XP_021032078
Ensembl:
MGP_CAROLIEiJ_G0017363
UniProt:
A0A6P5QFV9
LinkDB
All DBs
Position
11:108628573..108632497
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AA seq
507 aa
AA seq
DB search
MNLLDPFMKMTDEQEKGLSGAPSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDL
KKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEAEEATEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPPTPPTT
PKTDVQAGKVDLKREGRPLAEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPP
NGHPGVPATHGQVTYTGSYGISSTAPTPATAGHVWMSKQQAPPPPPQQPPQAPQAPQAPP
QQQAPPQQPQAPQQQQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSEQQQHSPQQISYSP
FNLPHYSPSYPPITRSQYDYADHQNSGSYYSHAAGQGSGLYSTFTYMNPAQRPMYTPIAD
TSGVPSIPQTHSPQHWEQPVYTQLTRP
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctggaccccttcatgaagatgaccgacgagcaggagaagggcctgtctggc
gcccccagccccaccatgtcggaggactcggctggttcgccctgtccctcgggctccggc
tcggacacggagaacacccggccccaggagaacaccttccccaagggcgagccggatctg
aagaaggagagcgaggaagataagttccccgtgtgcatccgcgaggcggtcagccaggtg
ctgaagggctacgactggacgctggtgcccatgcccgtgcgcgtcaacggctccagcaag
aacaagccacacgtcaagcggcccatgaacgccttcatggtgtgggcgcaggctgcgcgc
aggaagctggcagaccagtacccgcatctgcacaacgcggagctcagcaagactctgggc
aagctctggaggctgctgaacgagagcgagaagagacccttcgtggaggaggcggagcgg
ctacgcgtgcagcacaagaaagaccaccccgattacaagtaccagccccggcggaggaag
tcggtgaagaacggacaagccgaagccgaagaggccacggaacagactcacatctctcct
aacgccatcttcaaggcgctgcaagccgactccccacattcctcctcaggcatgagtgag
gtgcactccccgggcgagcactctgggcaatctcagggtccgccgaccccacccaccact
cccaaaaccgacgtgcaagctggcaaagttgatctgaagcgagaggggcgtcctctggca
gaggggggcagacagccccccatcgacttccgcgacgtggacatcggtgaactgagcagc
gacgtcatctccaacatcgagaccttcgacgtcaatgagtttgaccaatacttgccaccc
aacggccacccaggggttccggccacccacggccaggtcacctacactggcagctatggc
atcagcagcaccgcacccacccctgcgaccgcgggccacgtgtggatgtcgaagcagcag
gcgccgccccctcctccgcagcagcctccgcaggccccgcaagccccgcaggcgcctccg
caacagcaagcacccccgcagcagccgcaggcaccccagcagcagcaggcacacacgctc
accacgctgagcagcgagccaggccagtcccagcgaacgcacatcaagacagagcagctg
agccccagccactacagcgagcagcagcagcactccccgcaacagatctcctacagcccc
ttcaaccttcctcactacagcccctcctacccgcccatcacccgctcgcaatacgactac
gccgaccaccagaactccggctcctactacagtcacgcagccggccagggctcagggctc
tactccaccttcacttacatgaaccccgcgcagcgccccatgtacacccccatcgctgac
acctccggggtcccttccatcccgcagacccacagcccgcagcactgggaacaacccgtc
tacacacagctcaccagaccctga
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integrated database retrieval system
