Mus caroli (Ryukyu mouse): 110304831
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Entry
110304831 CDS
T05910
Symbol
Pnpt1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
110304831 (Pnpt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mcal03019
]
110304831 (Pnpt1)
03016 Transfer RNA biogenesis [BR:
mcal03016
]
110304831 (Pnpt1)
Enzymes [BR:
mcal01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
110304831 (Pnpt1)
Messenger RNA biogenesis [BR:
mcal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
110304831 (Pnpt1)
Transfer RNA biogenesis [BR:
mcal03016
]
Prokaryotic type
tRNA degradation factors
110304831 (Pnpt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
110304831
NCBI-ProteinID:
XP_021032108
Ensembl:
MGP_CAROLIEiJ_G0016153
UniProt:
A0A6P5QMA8
LinkDB
All DBs
Position
11:24782434..24814445
Genome browser
AA seq
784 aa
AA seq
DB search
MAACRLCCLCLCLRPLGCGPLGRPGRNRALSYLQMRALWSSTGSRAVTVDLGHRKLEISS
GKLARFADGCAVVQSGDTAVMVTAVSKIKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRE
IGSSDKEVLTSRVIDRSIRPLFPAGYFYDTQVLCNLLAVDGINEPDILAVNGASVALSLS
DIPWNGPVGAVRIGMIDGECVVNPTRKEMSSSTLNLVVAGAPKSQIVMLEASAENILQQD
FCHAIKVGVKYTQQIIQGIQQLVKEIGVAKRTPQKIFTPSAEIVKYTKIIAMEKLYAVFT
DYEHDKVSRDEAVNKIRLDTEEHLKEKFPEVDQFEIIESFNIVAKEVFRSIILNEYKRCD
GRDLTSLRNISCEVDMFKTLHGSALFQRGQTQVLCTVTFDSLESSIKSDQIITAINGVKD
KNFMLHYEFPPYATNETGKVTGVNRRELGHGALAEKALCPVIPKDFPFTIRVTSEVLESN
GSSSMASACGGSLALMDAGVPISSAVAGVAVGLVTKTNPEKGEIEDYRLLTDILGIEDYN
GDMDFKIAGTNKGITALQADIKLPGVPIKIIMEAIQQASVAKKEILQIMNKTISKPRASR
KENGPVVETVKVPLSKRAKFVGPGGYHLKKLQAETGVTISQVDEETFSIFAPTPTAMHEA
RDFITEICRDDQEQQLEFGAVYTATITEIRDTGVMVKLYPNMTAVLLHNSQLDQRKIKHP
TALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATTVLKTLNDRSSIVMGEPVSESSS
NSNP
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctgcaggctgtgctgcttgtgcctgtgcctccgaccgctgggctgcggcccc
ctcggccggcccgggcggaatcgggcactcagctatttgcagatgcgagcgctgtggagc
agcaccggatccagagcggtgactgtagacctgggacacagaaaattagaaatatcctct
gggaaactggcaagatttgctgatggctgtgctgtggtacagtcaggtgatactgcagta
atggtcacagcagtcagcaaaataaaaccttcaccttcccaattcatgccattggtggtg
gactaccgacagaaggctgctgcagcaggcagaatccccacaaactaccttagaagggag
attggctcttctgacaaagaggttcttacaagtcgagtaatagatcgttcaattcgccct
ctctttccagccggttatttttatgatactcaggttctctgtaatctgctagcagtagat
ggcatcaatgaacctgatatcctagcagttaatggtgcttctgtagccctgtccttgtca
gatatcccttggaatggacctgttggggcagtacgaataggaatgattgatggagaatgt
gtcgttaacccaacaaggaaagaaatgtcttctagcactttaaatttagtagttgccgga
gcacctaaaagccaaattgttatgttggaagcctctgcagaaaatattctacagcaggac
ttttgccatgctatcaaagttggggtgaagtatacacagcagataattcagggcatccag
cagttggtaaaagaaatcggtgttgccaagaggacaccgcagaagatatttactccttct
gcagagattgtgaagtacacgaagataattgccatggagaaactctatgccgtttttaca
gattatgaacatgacaaagtttccagggatgaagctgttaacaagataagattagataca
gaggagcatctaaaggaaaaatttccagaggttgaccaatttgaaataatagaatccttc
aacattgttgcaaaggaggttttccgaagtattattttgaatgaatacaaaaggtgtgat
ggaagggatctgacttcacttaggaatataagttgtgaggtagatatgtttaagacactt
catggatcagcattatttcagagaggacaaacacaggtactctgtactgttacatttgat
tcattagaatccagtattaagtcagatcaaattataacagctataaatggggtaaaagat
aaaaattttatgctgcactatgagttccctccttatgcaaccaatgaaaccggcaaagtt
actggtgtgaatcgaagagaacttggacatggtgctcttgctgagaaagctttgtgtcct
gttattcccaaagattttccttttaccataagagttacatctgaagtcctcgaatcaaat
gggtcatcttctatggcatctgcatgtggtggaagtttggcattaatggatgcaggggtc
ccaatttcatctgctgttgcaggtgtagcagtgggattggttaccaaaaccaatccagag
aaaggtgaaatagaagactaccgtttgctaacagatattctgggaattgaagattataat
ggtgacatggatttcaaaatagccggtacaaataaaggaataactgcattacaggctgat
attaagttacctggagtaccaattaaaattataatggaagccatccaacaagcgtcagtg
gcaaagaaggagatactgcagataatgaacaaaacgatttcaaaacctcgagcatcaaga
aaagaaaatggaccagttgtagaaacagtaaaggttccattatcaaaacgagcaaaattc
gttgggcctggtggatatcacttaaaaaaactccaggctgagacaggtgtaacaattagt
caggttgatgaagaaaccttctccatatttgcaccaacacctactgcaatgcatgaagca
agagatttcattacagaaatttgcagagatgatcaagagcaacaattagaatttggagca
gtttataccgcgacaataactgaaatcagagacactggagtgatggtaaaactatatcca
aacatgactgcagtgctgcttcataattcacaacttgaccaacgaaagattaaacatccc
actgccctaggactagaggttggccaagaaattcaggtcaaatactttggccgtgatcca
gctgatggaagaatgaggctttctcgtaaagtacttcagtctccagctacaactgttctc
aaaactctaaatgatagaagcagcattgtaatgggagagcctgtttcagagtcatcatct
aactctaacccttga
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