KEGG   Mus caroli (Ryukyu mouse): 110304909
Entry
110304909         CDS       T05910                                 
Symbol
Snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110304909 (Snf8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcal04131]
    110304909 (Snf8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcal04147]
    110304909 (Snf8)
Membrane trafficking [BR:mcal04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    110304909 (Snf8)
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110304909 (Snf8)
SSDB
Motif
Pfam: EAP30 AbiEi_4 RPA_interact_C EutK_C Plasmid_RAQPRD DUF4896
Other DBs
NCBI-GeneID: 110304909
NCBI-ProteinID: XP_021032252
Ensembl: MGP_CAROLIEiJ_G0017018
UniProt: A0A6P5QMM9
LinkDB
Position
11:91800815..91812842
AA seq 258 aa
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQLAQMSKQLDMFKTNLEEFASKHKQEIRK
NPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LEELHQQVLKGRGKFAQDVSQDDLIRAIKKLKALGTGFGIIPVGGTYLIQSVPAELNMDH
TVVLQLAEKNGYVTVSEIKTSLKWETERARQVLEHLLKEGLAWLDLQAPGEAHYWLPALF
TDLYSQEISAEEAKEAFP
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcaccggcgcggggtgggagctggcgccattgccaagaagaaactcgccgaggccaag
tataaggagcgagggactgtcttggctgaggaccagctggcccagatgtcaaaacagctg
gacatgttcaagaccaacctagaagaatttgccagcaagcataagcaagagatccggaag
aatcctgagttccgagtccagttccaagacatgtgtgcaaccattggggtggatcccctg
gcctctggaaaagggttttggtctgagatgctgggcgttggggacttctattatgaactg
ggtgtccagattattgaagtgtgcctggccctaaaacatcggaatggaggtctgataact
ctggaggagctacatcagcaggtgttaaaaggaaggggcaagtttgctcaggatgtcagc
caagacgacctgatcagggccatcaagaagctgaaagccctgggcactggattcggcatc
atccctgtgggaggcacttacctcattcagtctgttccagctgagctcaatatggatcac
actgttgtgctgcagctggccgagaaaaacgggtatgtgactgtcagtgaaatcaaaacc
agtcttaaatgggagacggagcgagcacggcaagtgctggaacacctgctgaaggaagga
ctggcctggctggatctgcaggctccaggggaggcccactactggctgccagctcttttc
acagatctctactcccaggagatatcagctgaggaggccaaagaagccttcccttga

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