Mus caroli (Ryukyu mouse): 110304957
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Entry
110304957 CDS
T05910
Symbol
Gabra6
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6 isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04080
Neuroactive ligand-receptor interaction
mcal04082
Neuroactive ligand signaling
mcal04723
Retrograde endocannabinoid signaling
mcal04727
GABAergic synapse
mcal04742
Taste transduction
mcal05032
Morphine addiction
mcal05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110304957 (Gabra6)
04082 Neuroactive ligand signaling
110304957 (Gabra6)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
110304957 (Gabra6)
04723 Retrograde endocannabinoid signaling
110304957 (Gabra6)
09157 Sensory system
04742 Taste transduction
110304957 (Gabra6)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
110304957 (Gabra6)
05033 Nicotine addiction
110304957 (Gabra6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110304957 (Gabra6)
Ion channels [BR:
mcal04040
]
Ligand-gated channels
GABA-A
110304957 (Gabra6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
110304957
NCBI-ProteinID:
XP_021032323
Ensembl:
MGP_CAROLIEiJ_G0016217
UniProt:
A0A6P5QGG2
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All DBs
Position
11:complement(37591028..37605432)
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AA seq
453 aa
AA seq
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MVLLLPWLFIILWLENAQAQLEDEGNFYSENVSRILDNLLEGYDNRLRPGFGGAVTEVKT
DIYVTSFGPVSDVEMEYTMDVFFRQTWTDERLKFKGPAEILSLNNLMVSKIWTPDTFFRN
GKKSIAHNMTTPNKLFRLMQNGTILYTMRLTINADCPMRLVNFPMDGHACPLKFGSYAYP
KTEIIYTWKKGPLYSVEVPEESSSLLQYDLIGQTVSSETIKSNTGEYVIMTVYFHLQRKM
GYFMIQIYTPCIMTVILSQVSFWINKESVPARTVFGITTVLTMTTLSISARHSLPKVSYA
TAMDWFIAVCFAFVFSALIEFAAVNYFTNLQSQKAERQAQTAATPPVAKSKAAESLEAEI
VVHSDSKYHLKKRISSLTLPIIPSSEASKVLSRTPILQSTPVSPPSLLPAIGGTSKIDQY
SRILFPVAFAGFNLVYWIVYLSKDTMEVSSTVE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgcttctcccctggctcttcattattctatggctagaaaatgcccaagctcaa
ctggaagatgaaggcaacttctactctgaaaatgtcagtcggattcttgacaacttgctg
gaaggctatgacaaccgtctacggccgggatttggaggtgctgtaacagaagtcaaaaca
gacatctatgtgaccagctttggacctgtgtcagatgtggagatggagtatacaatggat
gttttcttccgccagacttggactgatgagaggctgaagtttaaaggccctgctgagatt
ctgagcttaaataacttgatggtcagtaagatctggactcctgacacttttttccggaat
gggaaaaagtcaattgctcacaacatgaccacccccaacaagctcttccgattaatgcag
aatggaacaatcctctataccatgaggctcaccatcaacgccgattgccccatgagattg
gttaacttccctatggatggacatgcttgtccactcaagtttgggagctatgcttatcct
aaaactgaaatcatatatacatggaaaaaaggaccactttactcagtagaagtcccagaa
gaatcttctagcctcctccagtatgatttgattgggcaaacagtttctagtgagacaatt
aaatctaacactggtgaatatgtaataatgacagtctatttccacttacaaaggaagatg
ggctatttcatgatccagatatacactccgtgcatcatgacagtcattctttctcaagtg
tctttttggattaataaggagtcagtcccagcaagaaccgtctttggaatcaccactgtt
ttaaccatgaccacattaagcatcagtgctaggcactctctacctaaagtgtcctatgca
accgccatggattggttcatagctgtatgctttgcttttgtcttttctgctctcattgaa
ttcgcagctgtcaactacttcaccaatctccagtcacagaaggctgaaaggcaggcacaa
actgcagccacgccccctgtggcaaagtcaaaagcagctgaatcactggaagcagagatt
gttgtgcattctgactccaagtaccatctgaagaagagaatcagctctctgactttgccc
atcattccatcttctgaggccagcaaagtcctcagtagaacacccatcttacaatcgaca
cctgtctctcccccatcgctcttaccagccatcgggggcaccagcaaaatagatcagtat
tctcgaattctcttcccagtagcatttgcaggattcaaccttgtgtactggatagtttac
ctttccaaggatacaatggaagtgagcagtactgttgagtag
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