Mus caroli (Ryukyu mouse): 110304986
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Entry
110304986 CDS
T05910
Symbol
Trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04080
Neuroactive ligand-receptor interaction
mcal04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110304986 (Trpv1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
110304986 (Trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110304986 (Trpv1)
Ion channels [BR:
mcal04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110304986 (Trpv1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
110304986
NCBI-ProteinID:
XP_021032373
Ensembl:
MGP_CAROLIEiJ_G0016692
UniProt:
A0A6P5QPS6
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Position
11:67949985..67977266
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AA seq
839 aa
AA seq
DB search
MEKWTSLDSDESEPPPQENSCPDPPDRDPNSKPPPAKPHIFATRSRTRLFGKGDSEEASP
MDCPYEEGGLASCPIITVSSVVTLQRSVDGPTCLRQTSQDSVSTGVETPPRLYDRRSIFD
AVAQSNCQELESLLSFLQKSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDI
ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKKT
KGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTT
DNTKFVTNMYNEILILGAKLHPTLKLEELTNKKGLTPLALAASSGKIGVLAYILQREIHE
PECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLN
RLLQDKWDRFVKRIFYFNFFVYCLYMIIFTTAAYYRPVEGLPPYKLNNTIGDYFRVTGEI
LSVSGGVYFFFRGIQYFLQRRPSLKSLFVDSYSEILFFVQSLFMLVSVVLYFSHRKEYVA
SMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLI
EDGKNNSLPVESLPHKCRGSACRPGNSYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVF
IILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKA
FRSGKLLQVGFTPDGKDDFRWCFRVDEVNWTTWNTNVGIINEDPGNCEGVKRTLSFSLRS
GRVSGRNWKNFALVPLLRDASTRDRHSTQPEEVQLKHYTGSLKPEDAEVFKDSMAPGEK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggagaaatggactagcttagactcggatgaatctgagcccccaccccaagagaactcc
tgcccagaccctccagacagagaccctaactccaagccacctccagccaagccccacatc
tttgctaccaggagtcgcacccggctttttgggaagggtgattcagaggaggcctctccc
atggactgcccttatgaggaaggcgggctggcctcctgccctatcatcactgtcagctct
gttgtcactctccagaggtctgtggatggacctacctgtctcaggcagacatcccaggac
tctgtctccactggtgttgagacgcccccaaggctctatgatcgcaggagcatcttcgac
gctgtggctcagagtaactgccaggagctggagagcctgctgtccttcctgcagaagagc
aagaagcgcctgactgacagcgagttcaaagacccagagacgggaaagacctgtctgctc
aaagccatgctcaatctgcacaatgggcagaatgacaccattgctctgctcctggacatt
gcccggaagacagatagcctgaagcagtttgtcaacgccagctacacagacagctactac
aagggccagacagcattgcacattgccattgaaaggcggaacatggcactggtgaccctc
ttggtggagaatggagcagatgttcaggccgccgctaacggggacttcttcaagaaaacc
aaagggaggcctggcttctactttggtgagctgcccctgtccctggctgcgtgcaccaac
cagctggccattgtgaagttcctgctgcagaactcctggcagccagcagacatcagtgca
cgggattcggtgggcaacacggtgctgcacgccctggtggaggtggcagataacacaact
gacaacaccaagtttgtgacaaacatgtacaacgagatcctgatcctgggggccaaactc
caccccacgctgaagctagaagaactcactaacaagaaggggcttacaccgctggctctg
gctgccagcagtgggaagatcggggtcttggcctacattctccagagggagatccacgaa
ccagagtgccggcacctgtccaggaagttcactgaatgggcctatgggcctgtgcactcc
tccctttatgacctgtcctgcattgacacctgtgagaagaactcagtgctggaggtgatc
gcctacagtagcagtgagacccccaaccgccacgacatgcttctcgtggagcccttgaac
cgactcctgcaggacaagtgggacagatttgtcaagcgcatcttctacttcaacttcttc
gtctactgcttgtatatgatcatcttcaccacggctgcttactatcggcctgtggaaggc
ttgcccccctataagctgaataacaccattggggactatttccgcgtcactggagagatc
ctgtctgtgtcaggaggagtctacttcttcttcagagggatccagtatttcctgcagagg
cgaccgtccctcaagagtctgtttgtggacagctacagtgagatacttttctttgtacag
tcgctgttcatgctggtgtctgtcgtactgtacttcagccatcgcaaggagtatgtggct
tccatggtgttctccctggccatgggctggaccaacatgctctactacacccgaggattc
cagcagatgggcatctatgctgtcatgattgagaagatgatcctcagagacctgtgtcgg
tttatgttcgtctacctcgtgttcttgtttggattttccacagccgtagtgacactgatc
gaggatgggaagaataactcactgcctgtggagtccctaccacacaagtgtcggggatct
gcctgcaggccaggtaactcttacaacagcctgtattccacatgtctggagctgttcaag
ttcaccatcggcatgggcgacctggagttcaccgagaactatgacttcaaggctgtcttc
atcatcctgttactggcctatgtgattctcacctacatcctcctgctcaacatgctcatt
gctctcatgggcgagactgtcaacaagattgcacaagagagcaagaacatctggaagctg
cagcgagccatcaccatcctggatacagagaagagtttcctgaagtgcatgaggaaggcc
ttccgctccggcaagctgctgcaggtggggttcacgccggatggcaaggatgacttccgg
tggtgcttcagggtggatgaggtgaactggactacctggaacaccaacgtgggcatcatc
aacgaggacccaggcaactgtgagggcgtcaagcgcaccctgagcttctctctgcggtca
ggccgagtttcagggagaaactggaagaactttgccctggttccccttctgagggacgca
agcactcgagataggcatagcacccagccggaagaagttcagctgaagcattatacggga
tcccttaagccagaggatgctgaggtcttcaaggattccatggccccaggggagaaatga
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