KEGG   Mus caroli (Ryukyu mouse): 110305079
Entry
110305079         CDS       T05910                                 
Symbol
Chmp6
Name
(RefSeq) charged multivesicular body protein 6 isoform X2
  KO
K12195  charged multivesicular body protein 6
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal03250  Viral life cycle - HIV-1
mcal04144  Endocytosis
mcal04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110305079 (Chmp6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110305079 (Chmp6)
  09143 Cell growth and death
   04217 Necroptosis
    110305079 (Chmp6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcal04131]
    110305079 (Chmp6)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mcal04147]
    110305079 (Chmp6)
Membrane trafficking [BR:mcal04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    110305079 (Chmp6)
Exosome [BR:mcal04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110305079 (Chmp6)
  Exosomal proteins of other body fluids (saliva and urine)
   110305079 (Chmp6)
SSDB
Motif
Pfam: Snf7 Cas_Cas1
Other DBs
NCBI-GeneID: 110305079
NCBI-ProteinID: XP_021032514
Ensembl: MGP_CAROLIEiJ_G0017503
UniProt: A0A6P5QQ22
LinkDB
Position
11:115818930..115824656
AA seq 200 aa
MGNLFGRKKQSRVTEQDRAILQLKQQRDKLRQYQKRVTQQLERERALARQLLRDGRKERA
KLLLKKKRYREQLLDRTENQISSLEAMVQSIEFTQIEMKVMEGLQVGNECLNKMHQVMSI
EEVERILDETQEAVEYQRQIDELLAGNFTQEDEDAILEELNAITQEQMELPEVPSEPLPD
RNPEAPAKARSRQAELVAAS
NT seq 603 nt   +upstreamnt  +downstreamnt
atgggcaacctgttcggccgcaagaagcagagccgagtcaccgaacaggacagggccatc
ctgcaactgaagcagcagagggacaaactgaggcagtaccagaagagggtcacgcagcag
ctggagagggagcgggccctggccaggcagctgctgcgggatggcaggaaagaacgagcc
aagctgctgctcaagaagaagaggtaccgggagcaactgctcgataggacagaaaaccag
atcagcagcctggaagccatggttcagagcatcgagttcacgcagattgagatgaaggtg
atggaggggctacaggtggggaacgaatgtctgaataagatgcaccaggtgatgtccata
gaggaggtggagaggatcctggacgagacccaggaggcagtggagtaccagcggcaaatt
gatgagctgctggctggaaacttcacccaggaggacgaggacgccatcctggaagagctg
aatgcaatcactcaggaacaaatggagttaccagaggttccgtcagagccgctccctgac
agaaacccagaagcccctgccaaggccagatccaggcaggcagagctggtggcggcttca
taa

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