Mus caroli (Ryukyu mouse): 110305099
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Entry
110305099 CDS
T05910
Symbol
Vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mcal04131
]
110305099 (Vps53)
Membrane trafficking [BR:
mcal04131
]
Protein recycling
Others
EARP complex
110305099 (Vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
110305099 (Vps53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Laminin_II
Sec8_N
NBD94
hAT-like_RNase-H
COG3_N
FUSC
COG5_N
Med11
HrpJ
XhlA
Motif
Other DBs
NCBI-GeneID:
110305099
NCBI-ProteinID:
XP_021032544
Ensembl:
MGP_CAROLIEiJ_G0016753
UniProt:
A0A6P5QND3
LinkDB
All DBs
Position
11:complement(70989753..71121095)
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AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPEVQLAIEQVFPSQDPLDQADFNAVEYINTLFPTEQSLAN
IDDVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACLVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWVKRQLVDYEE
KYGRMFPREWCMTERISVEFCHVTRTELSKIMRARAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGTLKKLESPPPSTNPFLEDETTPEMEELALEKGELEQPKKPKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLSELIDRFVADFKAQGPPKPSTEDGGAVLPSCADLFVYYKK
CLVQCSQLSTGEPMVALTTIFQKHLREYACKILSGNLPKTSSSSGGLTISSLLKEKEGSE
VARFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALIAMSKMPWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNSETFQKILDMKGLKR
SEQSSMLELLRQRLPAPPSGTEGSSTLSLMAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagtttgtggaggagctggaggctgtgctgcagctcacg
ccagaggtgcaacttgccatcgagcaggtatttccaagccaggatcctcttgatcaagct
gacttcaatgccgttgagtatatcaatactctgttcccaacagagcaatctctggcaaac
attgacgatgttgtgaacaaaattagactaaaaataaggagactggatgacaatatccgg
actgtcgtaagaggtcagacaaatgtggggcaggatggaaggcaagcacttgaagaggcc
cagaaagccattcagcaactctttggcaaaatcaaggatatcaaagacaaggcagaaaag
tcggaacaaatggtgaaagagatcacccgagatattaagcagttagatcacgccaagcgc
cacctgaccacgtcaatcacgaccctgaaccacctgcacatgctggcaggcggggtggac
tccctggaagccatgaccaggcgcagacagtatggagaagttgctaatctccttcagggt
gtaatgaatgttctggagcactttcacaaatacatgggaatcccacagatccgacagctt
tctgaaagggtgaaggctgcacagacggagttaggacagcaaatcctggctgactttgaa
gaagcatttccttcgcagggtaccaagaggccgggaggacccagcaatgtcctgagagat
gcgtgcctggtggctaatattttggaccccagaatcaaacaagaaatcatcaaaaagttt
attaaacagcatctatcagagtatctagtactttttcaagaaaaccaagatgtcgcctgg
ctggacaaaattgacagacgttatgcctgggtgaaacgccagctggtggactatgaagag
aagtatggccggatgtttcctcgggagtggtgcatgacagagaggatctcagtagaattt
tgccacgtgacaaggacagaactttccaaaatcatgcgagccagagctaaggaaattgaa
gtgaaattgcttctttttgcgatccagagaacaaccaactttgaggggtttcttgcaaaa
cgcttctccggttgcaccctgacagatggaaccctgaaaaagctggagtccccaccacca
tctaccaatcctttcctggaagatgagacaacaccagagatggaggagctggctctggag
aaaggagagttagagcaaccaaagaagcccaaggccccagacaacccgtttcatggcatt
gtttccaagtgttttgagcctcatctctacgtgtacattgagtcccaggacaaaaacctc
agcgagctgatagaccggtttgtggcagatttcaaagcccagggcccccccaagcccagc
actgaggacgggggcgctgtgctgcccagctgcgcggacctctttgtctactacaagaag
tgcttggtgcagtgctcgcagctcagcaccggcgagcccatggtcgccctgaccaccatc
ttccagaagcacctccgagaatacgcctgcaaaatcctctctggcaacctgcctaaaacc
agcagcagcagtggggggctgaccatcagcagcctcctcaaagagaaggagggctcagaa
gtggccaggttcactctggaggagctgtgtctcatctgcagcatcctgagcacagccgag
tactgtctggctaccacccagcagctagaagaaaaactcaaagaaaaagttgatgtgagt
ctgactgaacgaattaatctcacaggagaaatggacacattcagcactgtcatctccagc
agcatccagctgttggttcaagatctggatgcagcctgtgaccctgccctgattgccatg
agcaagatgccatggcagaatgtggagcatgttggtgaccagagcccttatgtcacttct
gttattcttcacattaagcagaatgtccccatcatccgtgacaacctggcttccacacgg
aaatacttcacacagttctgcattaaatttgcaaattcgttcattcccaaattcatcacc
cacctcttcaagtgtaagccgatcagcatggtgggagcagagcagcttctgctggacacc
cactccctgaagatggtcctgctcgacctcccatccattggctcccaggtggtgaggaag
gcccctgccagttacactaagattgtcgtgaaaggcatgacccgggctgaaatgatcctc
aaggtggtgatggcccctcatgaaccgttggtagtatttgttgacaactacatcaaactc
cttacggactgcaactcagaaaccttccagaaaatactggatatgaaggggctgaagagg
agcgagcagagcagcatgctggaacttttgcggcagaggctccctgccccgccctcgggt
acagaaggttccagcaccctgtcgctgatggccccaacaccagagcaggagtcatcccga
atccgcaaactggagaagctgattaaaaagagactgtaa
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