Mus caroli (Ryukyu mouse): 110305133
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Entry
110305133 CDS
T05910
Symbol
Gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04080
Neuroactive ligand-receptor interaction
mcal04082
Neuroactive ligand signaling
mcal04723
Retrograde endocannabinoid signaling
mcal04727
GABAergic synapse
mcal04742
Taste transduction
mcal05032
Morphine addiction
mcal05033
Nicotine addiction
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110305133 (Gabra1)
04082 Neuroactive ligand signaling
110305133 (Gabra1)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
110305133 (Gabra1)
04723 Retrograde endocannabinoid signaling
110305133 (Gabra1)
09157 Sensory system
04742 Taste transduction
110305133 (Gabra1)
09160 Human Diseases
09165 Substance dependence
05032 Morphine addiction
110305133 (Gabra1)
05033 Nicotine addiction
110305133 (Gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mcal04040
]
110305133 (Gabra1)
Ion channels [BR:
mcal04040
]
Ligand-gated channels
GABA-A
110305133 (Gabra1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
110305133
NCBI-ProteinID:
XP_021032591
Ensembl:
MGP_CAROLIEiJ_G0016216
UniProt:
A0A6P5QQ95
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Position
11:complement(37417252..37469780)
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AA seq
455 aa
AA seq
DB search
MKKSRGLSDYLWAWTLILSTLSGRSYGQPSQDELKDNTTVFTRILDRLLDGYDNRLRPGL
GERVTEVKTDIFVTSFGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMTVLRLNNLMASKI
WTPDTFFHNGKKSVAHNMTMPNKLLRITEDGTLLYTMRLTVRAECPMHLEDFPMDAHACP
LKFGSYAYTRAEVVYEWTREPARSVVVAEDGSRLNQYDLLGQTVDSGIVQSSTGEYVVMT
THFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISAR
NSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKPKKVKDPL
IKKNNTYAPTATSYTPNLARGDPGLATIAKSATIEPKEVKPETKPPEPKKTFNSVSKIDR
LSRIAFPLLFGIFNLVYWATYLNREPQLKAPTPHQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaagtcggggtctctctgactatctttgggcctggaccctcattctgagcaca
ctgtcgggaagaagctatggacagccctcccaagatgaacttaaagacaacaccactgtc
ttcacaaggattttggaccgactgctggatggttatgacaatcgtctgagaccaggtttg
ggagagcgtgtaactgaagtgaagaccgacattttcgtcaccagtttcggacctgtttca
gaccacgatatggagtatacaatagatgtgtttttccgtcaaagttggaaggatgaaaga
ttaaaattcaaaggacccatgacagtgctccggctaaacaaccttatggccagtaaaatc
tggactccagatacatttttccacaatggaaagaagtctgtggcccacaacatgaccatg
cctaataagctcctgcgtatcacagaggatggcactctgctgtataccatgaggttgacc
gtgagagctgaatgcccaatgcacttggaagacttccctatggatgctcatgcctgccca
ctaaaatttggaagctatgcttatacaagagcagaagttgtctatgagtggacaagagag
ccagcccgttcagtggttgtggcagaagatgggtcacgtttaaaccagtatgaccttctt
ggacaaacagttgactctggaattgttcagtccagtactggagaatatgtggttatgacg
actcacttccacttgaagagaaaaattggctactttgttattcaaacgtatctgccatgc
ataatgacagttattctctcccaagtctccttctggcttaacagagagtcagtaccagca
agaactgtctttggagtgacgactgttctgactatgacaaccttgagtatcagtgccaga
aattccctcccgaaggtggcttatgcaacagctatggactggtttattgcagtatgctat
gcctttgttttctcagctctgattgagtttgccacagtaaactatttcaccaagagaggg
tatgcgtgggatggcaaaagcgtggttccagaaaagccaaagaaagtgaaggatcctctc
attaagaaaaacaacacatatgcccctacagcaaccagctatacccctaacttagccagg
ggtgaccccggcttggcaactattgctaaaagtgcgaccatagaaccgaaagaagtcaag
cctgagacaaaaccaccagaacccaagaaaacctttaacagcgtcagcaaaatcgaccga
ctgtcaagaatagcctttccgctgctatttggaatctttaacttagtctattgggccacg
tatttaaacagagagcctcagctaaaagcccccacaccccatcaatag
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