Mus caroli (Ryukyu mouse): 110305141
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Entry
110305141 CDS
T05910
Symbol
Rps27a
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03010
Ribosome
mcal04120
Ubiquitin mediated proteolysis
mcal04137
Mitophagy - animal
mcal04140
Autophagy - animal
mcal05012
Parkinson disease
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05167
Kaposi sarcoma-associated herpesvirus infection
mcal05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
110305141 (Rps27a)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110305141 (Rps27a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110305141 (Rps27a)
04137 Mitophagy - animal
110305141 (Rps27a)
09160 Human Diseases
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
110305141 (Rps27a)
05167 Kaposi sarcoma-associated herpesvirus infection
110305141 (Rps27a)
09164 Neurodegenerative disease
05012 Parkinson disease
110305141 (Rps27a)
05022 Pathways of neurodegeneration - multiple diseases
110305141 (Rps27a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
mcal03011
]
110305141 (Rps27a)
04121 Ubiquitin system [BR:
mcal04121
]
110305141 (Rps27a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mcal04147
]
110305141 (Rps27a)
Ribosome [BR:
mcal03011
]
Ribosomal proteins
Eukaryotes
Small subunit
110305141 (Rps27a)
Archaea
110305141 (Rps27a)
Ubiquitin system [BR:
mcal04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
110305141 (Rps27a)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110305141 (Rps27a)
Exosomal proteins of colorectal cancer cells
110305141 (Rps27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
Dsc3_N
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
110305141
NCBI-ProteinID:
XP_021032599
Ensembl:
MGP_CAROLIEiJ_G0016159
UniProt:
A0A6P5QUL4
LinkDB
All DBs
Position
11:complement(25178268..25180456)
Genome browser
AA seq
156 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRE
CPSDECGAGVFMGSHFDRHYCGKCCLTYCFNKPEDK
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagacccttacggggaaaaccatcacgctcgaggttgaaccctcg
gacactatagaaaatgtaaaggccaagatccaggataaggaaggaattcctcctgatcag
cagagactaatctttgctggtaagcagctggaagatggccggactttgtctgactacaac
attcaaaaggagtccacccttcatctggtgttgagacttcggggtggtgctaagaaaagg
aagaagaagtcgtacaccacccccaagaagaacaagcataagaggaagaaggttaagttg
gctgtgctgaaatactataaggtggatgaaaatggcaaaattagccgacttcgtcgagag
tgtccttctgatgaatgtggtgctggagttttcatgggaagccactttgacaggcactac
tgtggcaagtgttgtctgacttactgcttcaacaaaccagaagacaagtag
DBGET
integrated database retrieval system
