Mus caroli (Ryukyu mouse): 110305183
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Entry
110305183 CDS
T05910
Symbol
Ubtf
Name
(RefSeq) nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110305183 (Ubtf)
03021 Transcription machinery [BR:
mcal03021
]
110305183 (Ubtf)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
110305183 (Ubtf)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
110305183 (Ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
DUF4473
Chlor_dismutase
Motif
Other DBs
NCBI-GeneID:
110305183
NCBI-ProteinID:
XP_029339718
Ensembl:
MGP_CAROLIEiJ_G0017248
UniProt:
A0A6P7REW6
LinkDB
All DBs
Position
11:complement(98254233..98266586)
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AA seq
764 aa
AA seq
DB search
MNGEADCPTDLEMAAPKGQDRWSQEDMLTLLECMKNNLPSNDSSKFKTTESHMDWEKVAF
KDFSGDMCKLKWVEISNELRKFRTLTELILDAQEHVKNPYKGKKLKKHPDFPKKPLTPYF
RFFMEKRAKYAKLHPEMSNLDLTKILSKKYKELPEKKKMKYIQDFQREKQEFERNLARFR
EDHPDLIQNAKKSDIPEKPKTPQQLWYTHEKKVYLKVRPDATTKEVKDSLGKQWSQLSDK
KRLKWIHKALEQRKEYEEIMRDYIQKHPELNISEEGITKSTLTKAERQLKDKFDGRPTKP
PPNSYSLYCAELMANMKDVPSTERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLR
FLESLPEEEQQRVLGEEKMLNINKKQTTSPASKKPSQEGGKGGSEKPKRPVSAMFIFSEE
KRRQLQEERPELSESELTRLLARMWNDLSEKKKAKYKAREAALKAQSERKPGGEREDRGK
LPESPKRAEEIWQQSVIGDYLARFKNDRVKALKAMEMTWNNMEKKEKLMWIKKAAEDQKR
YERELSEMRAPPAATNSSKKMKFQGEPKKPPMNGYQKFSQELLSNGELNHLPLKERMVEI
GSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKSLSPQDRAAYKEYISNKRKNMTKLR
GPNPKSSRTTLQSKSESEEDDDEEEEDDEEEEEEEDDENGDSSEDGGDSSESSSEDESED
GDENDDDDDDEDDEDDDDEDEDNESEGSSSSSSSSGDSSDSDSN
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaacggagaagcggactgtcccacagacctggaaatggccgcccccaaaggccaagac
cgctggtcccaagaagatatgctgactctgctggaatgcatgaagaacaatctcccatcc
aacgacagctccaagttcaaaaccacagagtcgcacatggattgggaaaaagttgcattt
aaggatttttcaggagatatgtgcaagctcaaatgggtggagatttctaacgagttaagg
aagttccgtacattgacagaattgatcctcgatgctcaggaacatgttaaaaacccttac
aaaggcaaaaagctcaagaaacaccccgattttccaaagaagcctctcaccccgtacttc
cgcttcttcatggagaagcgggccaagtacgcgaagctccacccggagatgagcaacctg
gacctgactaagatcctgtctaagaaatacaaggaacttccagagaagaagaagatgaaa
tatattcaggacttccagagggagaaacaggagttcgagcgaaacctggcccgattcagg
gaggatcaccctgaccttatccagaatgccaagaagtcggacatccccgagaagcccaaa
actccccagcaactgtggtacacccacgagaagaaggtgtatctcaaagtgcggccggat
gccactacgaaggaggtgaaggactccctggggaagcagtggtctcagctctcggacaaa
aagaggctgaaatggattcataaggccctggagcagcggaaggagtacgaggagattatg
cgggactatatccagaagcatcctgagttgaacatcagtgaggaaggcatcaccaagtcc
accctcaccaaggccgagcgccagctcaaggacaagttcgatgggcgacccaccaagccg
cctccgaacagctactccctgtactgtgcggagctcatggccaacatgaaggatgtgccc
agcacagagcgcatggtgctatgtagccagcaatggaagctgctctctcagaaggagaag
gatgcatatcacaagaaatgtgaccagaaaaagaaagattatgaggtagagctgctgcgg
ttccttgagagcttgcccgaggaagagcagcagcgggttctgggggaggagaagatgctg
aacatcaataagaagcagaccaccagtccggcctccaagaagccttcacaggaaggtggc
aagggtggctccgagaagcccaagcggcctgtgtctgctatgttcatcttctcggaggag
aagcgaaggcagctacaggaggaacgacctgagctctccgaaagcgaactgacccgcctg
ctggcccgcatgtggaacgacttgtccgagaagaagaaggctaaatacaaggcccgggag
gctgcgctaaaggcgcagtctgagaggaagccgggcggggagcgtgaagataggggcaag
ctgccggagtcgcccaagagagctgaggagatctggcagcagagtgtcatcggagactat
ctggcccgcttcaagaatgaccgggtgaaagccttgaaagccatggagatgacttggaac
aacatggagaagaaggagaagctgatgtggattaagaaggcagcagaagaccaaaaacga
tatgagagagagttaagtgagatgcgggcccctccagctgctacaaactcttccaagaag
atgaagttccagggggagcccaagaaacctcctatgaacggttaccagaagttctcccag
gagctgctgtccaatggggagctaaatcacctgccactgaaggagcgcatggtagagatt
ggcagccgctggcagcgcatctcccagagccagaaggagcactataagaagctagcggag
gagcagcagaggcagtacaaggtgcacttggacctctgggtcaagagcctgtctccccag
gaccgcgcagcgtacaaagaatacatctccaacaaacgtaagaacatgaccaagctccga
ggcccaaaccccaagtctagccggaccaccctgcagtctaagtcggagtctgaggaggat
gacgatgaggaggaggaggacgacgaggaggaggaggaagaggaagatgatgagaacggt
gactcttctgaggacggcggggactcttctgagtccagcagtgaagatgaaagcgaggat
ggggacgagaatgatgatgacgacgacgatgaagatgacgaagatgacgatgatgaggat
gaagacaacgagtctgagggcagtagctccagctcttcatcctcaggggactcttcggat
tctgactccaactga
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