Mus caroli (Ryukyu mouse): 110305252
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Entry
110305252 CDS
T05910
Symbol
Krt39
Name
(RefSeq) keratin, type I cytoskeletal 39
KO
K07604
type I keratin, acidic
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04915
Estrogen signaling pathway
mcal05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
110305252 (Krt39)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
110305252 (Krt39)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110305252 (Krt39)
04147 Exosome [BR:
mcal04147
]
110305252 (Krt39)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
110305252 (Krt39)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
110305252 (Krt39)
Exosomal proteins of other body fluids (saliva and urine)
110305252 (Krt39)
Exosomal proteins of colorectal cancer cells
110305252 (Krt39)
Exosomal proteins of melanoma cells
110305252 (Krt39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
YwqH-like
DMPK_coil
T2SSM_b
Motif
Other DBs
NCBI-GeneID:
110305252
NCBI-ProteinID:
XP_021032782
Ensembl:
MGP_CAROLIEiJ_G0017120
UniProt:
A0A6P5QHJ3
LinkDB
All DBs
Position
11:complement(95444181..95450736)
Genome browser
AA seq
482 aa
AA seq
DB search
MDTKGSTVTISSSTPPQNCSGNTNFRTNSSSNKSCCHDGQSTGCALQTPQGQGCGSSPCL
YRCPHYLIRTYSFHPCLDDGSRCTEGINTHEKETMQILNERLANYLEKVRMLEGENADLE
DKIQEACSKALPILCPDYLSYYTTIEELQQKILCTKAENSRLVSQIDNTKLAADDLRANY
EAELSLRQLVEADANGLKQILDSLTLSKADLEARVQSLTEELLCLKTNHEEEVNSLQCQL
GDRINIEVTAVPSVDLNRILQEMRCRYESIMETNRKDVEEWFNTQMEELNQQVVSSSQQQ
QCCQKDIIELRRTISALEVELQAQHRMRESQECILTETEARYTALLAQIQSLIHNLEAQV
ADIRSALQRQNQEYEVLLDVKSRLECEIATYRSLLESLDSRLPCNPCATKWEPSCQARAM
ECFTPVYTSSSLPGIHKPCRASGPPSRILVKICTITKEIKDGKVISSYEHVQPCYITRAT
KV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggataccaagggctctacagtgacgatttcttcttcaaccccaccccaaaactgctct
gggaatacaaattttaggacgaactcttcttctaacaagagctgttgtcatgatggccag
tcaactggctgcgctctacaaactccccagggtcagggctgtggatccagcccttgcctt
tatcgctgccctcattacttgataagaacctacagcttccatccttgtctggatgacggc
agcaggtgcactgaaggcattaacactcatgagaaggagaccatgcagattttgaacgaa
cgccttgcaaactatctggaaaaggtgcggatgctggaaggagagaacgcggacctagag
gataaaatccaggaggcatgcagcaaggcactccccatcctgtgtcctgactacctgtcc
tactacaccaccatcgaggagctgcagcagaagatcttgtgtaccaaggctgaaaattcc
agactggtctcacaaattgacaacaccaaactggctgcagatgacttgagagccaactat
gaagctgagttgtccctgcgccagcttgtggaagccgatgccaacggcctgaagcagatc
ctagattcactcactctgagcaaggctgacctggaggcccgagtccagtctctgacggag
gaacttctgtgcctcaaaacgaatcatgaggaagaagttaattccttacagtgccaacta
ggggacagaatcaacattgaagtaacagctgtcccttctgttgacctaaatcgaatccta
caagaaatgagatgccggtacgagtccatcatggagacaaaccgtaaagacgtagaagaa
tggttcaatacacagatggaggaactgaatcaacaagtagtgagcagctctcagcagcag
cagtgctgccagaaggacatcatagagctgagacggaccataagtgccctcgaggttgag
ctgcaggcccagcacagaatgagagagtcccaggaatgcatcctgacggagacggaggcc
cgctacacagccctgctggcccaaatccagagtctgatccacaacctggaggctcaggtg
gcagatatccgcagtgccctgcaaagacagaaccaggaatatgaagttctgctagacgtc
aagtcccggctggagtgtgagatagccacataccgaagccttcttgagagcttagatagc
aggcttccctgtaacccatgtgccactaagtgggagccatcctgccaggccagagctatg
gagtgttttaccccagtttatacatcttcatcactccctgggattcacaagccctgccgt
gcctctggacccccatcccggatactggttaagatatgcaccatcaccaaggagatcaag
gatgggaaggtcatttcttcttacgagcatgtgcagccttgctacatcaccagagctacc
aaagtctag
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