Mus caroli (Ryukyu mouse): 110305253
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Entry
110305253 CDS
T05910
Symbol
Krt40
Name
(RefSeq) keratin, type I cytoskeletal 40 isoform X1
KO
K07604
type I keratin, acidic
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04382
Cornified envelope formation
mcal04915
Estrogen signaling pathway
mcal05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
110305253 (Krt40)
09158 Development and regeneration
04382 Cornified envelope formation
110305253 (Krt40)
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
110305253 (Krt40)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mcal04812
]
110305253 (Krt40)
04147 Exosome [BR:
mcal04147
]
110305253 (Krt40)
Cytoskeleton proteins [BR:
mcal04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
110305253 (Krt40)
Exosome [BR:
mcal04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
110305253 (Krt40)
Exosomal proteins of other body fluids (saliva and urine)
110305253 (Krt40)
Exosomal proteins of colorectal cancer cells
110305253 (Krt40)
Exosomal proteins of melanoma cells
110305253 (Krt40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
UPF0184
UPF0242
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
110305253
NCBI-ProteinID:
XP_021032783
Ensembl:
MGP_CAROLIEiJ_G0017121
UniProt:
A0A6P5QUZ5
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All DBs
Position
11:complement(95466637..95472321)
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AA seq
439 aa
AA seq
DB search
MASDGSPSCCSSEPCAGTSGCATASFCPTNTTCLPNTCSTSRCQTPSFLCRASLPACCLS
PCYLAGGCNSPCLVGSCAWCEEGSFNSNEKETMQFLNDRLASYLERVRSLEENNAELECR
IREQCEPNAPLVCPDYQRYFDTIEELQQKILCTKAENSRLAVQVDNCKLAADDFRSKYES
ELSLRQLVENDITGLRGILGELTLCKSDLEAHVESMKDDLICLKKGHEEEVNLLREQLGD
RLSVELDTAPTVDLNKVLDEMRCQYERVLADNRRDAEEWFAAQTEELNQQQKSSVEQLEG
CQTEMLELKRKANTLEIELQAQQTLTESLECTVAETEAQYSTQLAQMQCLIDSVEHQLAE
IRCDLERQNQEYQVLLDTKARLECEINTYRGLLEKEDSRLPCNPGSRAPMPNSTCEPCSN
STCEPCSAYVICTVENCCA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgatggctcccctagctgctgctcttctgagccctgtgcagggacttccggc
tgcgcaactgcctcattctgccccactaacacaacttgcctccccaacacctgttccaca
tccagatgtcaaaccccgagcttcctctgcagggcttccctcccagcctgttgcctctca
ccatgctacttggctggtggctgtaacagtccttgcctggtggggagctgtgcatggtgt
gaggaaggatcgttcaacagtaatgagaaggagaccatgcagttcctgaatgaccgcctg
gccagctatctggagagggtgagaagcctggaagagaacaacgcagagctggagtgcagg
atccgagagcaatgcgagcccaatgcccctctggtctgccccgattatcagcggtacttc
gacactattgaagagctccaacaaaagatattgtgcacaaaggcagagaattctagactt
gccgttcaggtggacaactgcaaactggctgccgatgatttcaggtcaaaatatgagagt
gaactgtccctgcgccagctggtggagaacgacatcactggccttcgtggaatcctgggt
gagctgaccctgtgcaagtcagatctagaggcccacgtggagtctatgaaagatgatctg
atttgccttaaaaaaggccatgaagaggaggtcaacctgcttcgtgagcagcttggcgat
cggctcagcgtggagctggacactgcccccactgtggacctcaacaaggtcctggatgag
atgcgatgtcaatatgagagggtgctggccgacaaccgcagggatgcagaggagtggttt
gctgctcagacagaagagctgaaccagcagcaaaagtccagcgtggagcagttggagggc
tgccagactgagatgttggagttgaagcgcaaggccaacactctggaaattgagctccag
gcgcagcaaaccctgacggagtctctggagtgcactgtggcagaaaccgaggcccagtac
agcacgcaactggcccaaatgcagtgcctaattgacagtgtggagcaccagctggctgag
atccgctgtgacctggagcgtcagaaccaggagtatcaggtgctgctggacaccaaggcc
cggctggagtgtgagatcaacacgtacaggggcctgctggagaaggaggacagcagactc
ccctgcaatccaggctccagagcacccatgccgaacagcacgtgtgagccttgttcaaac
agcacgtgtgagccgtgttcagcctatgtgatttgcacagttgaaaactgctgtgcatga
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