Mus caroli (Ryukyu mouse): 110305282
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Entry
110305282 CDS
T05910
Symbol
Fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X1
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03460
Fanconi anemia pathway
mcal04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110305282 (Fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
110305282 (Fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110305282 (Fancl)
03400 DNA repair and recombination proteins [BR:
mcal03400
]
110305282 (Fancl)
Enzymes [BR:
mcal01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110305282 (Fancl)
Ubiquitin system [BR:
mcal04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110305282 (Fancl)
DNA repair and recombination proteins [BR:
mcal03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
110305282 (Fancl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
zf-HC5HC2H
zf-RING-like
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
110305282
NCBI-ProteinID:
XP_021032848
Ensembl:
MGP_CAROLIEiJ_G0016148
UniProt:
A0A6P5QV36
LinkDB
All DBs
Position
11:22113108..22189469
Genome browser
AA seq
375 aa
AA seq
DB search
MADVEASLLRHFPLLLPQNREKTIYEGFISAQGSDFHLRIVLPKDLQLKRARLLCSLQLK
NILNEYHQVVQQRMKHSPDLMSFMMELKMILEVALKNKQELCVQPPSCSFCKDLLTEIGA
IGWDKLACVESSFSTIKLKADDASGRKHLITVKLKAKYPVEPPDCVVDFPVPFSVSWTPQ
SSLVDVYSQFLVALETLKVFWDVMDEIDEKTWVLEPEKPPRSATARRIALGKNVSIAIEV
DPRHPTMLPEFCFLGADHVTKPLGMKLSGSIHLWDPENSLLQNLKDVLEIDFPARTILEE
SDFSMDCGICYARHLNGAIPDQVCNNPQCGQPFHEICLYEWLRGLSTSRQSFNVFFGDCP
YCSKPITLKMSGRKP
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtagaagcaagcctgttgcgccatttcccgctgctgcttcctcaaaaccgg
gagaaaactatatatgagggattcatttcggctcagggaagtgattttcacctcagaata
gtgctgcctaaggacctgcagctcaagagggcaagattactgtgtagcttgcagctgaaa
aatatacttaatgagtaccatcaagtagtccaacagagaatgaagcactctcctgatcta
atgagttttatgatggaattgaagatgattttggaagttgctttaaagaataaacaagag
ttgtgtgtacaaccaccttcttgcagtttctgcaaagaccttcttactgagataggagcc
attggttgggataaacttgcatgtgtggagagttccttcagcaccatcaagttaaaagca
gatgatgcttctggtaggaagcacctaatcactgtcaagttgaaggcaaagtatcctgta
gagccaccagattgtgttgtggactttcctgtcccattttctgtttcttggacaccacag
agctccttggttgatgtttatagtcaattcttggtggcattagagacgctgaaggtgttc
tgggatgttatggatgaaattgatgagaagacctgggtgctggaaccagagaaacctccc
cggagtgcaacagcacgcaggattgcattaggaaagaatgtttccatagccattgaggtg
gaccccaggcaccctaccatgcttcctgagttttgctttcttggagctgaccatgtgaca
aaacccctgggaatgaagctgagtggtagcattcatttatgggatccagaaaatagtctg
ttacaaaatttgaaagatgttttagaaattgatttcccagctcgtactatcttggaagaa
tctgactttagcatggactgtggaatctgttatgcccgtcacctgaatggtgccattcct
gatcaagtgtgtaataatccccagtgtggacagcctttccatgaaatatgtctgtatgag
tggctgagagggttgagcaccagcagacagagttttaacgtcttctttggtgactgtccc
tattgtagtaagccaattaccttgaaaatgtctgggagaaaaccttga
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