Mus caroli (Ryukyu mouse): 110305365
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Entry
110305365 CDS
T05910
Symbol
Smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03082
ATP-dependent chromatin remodeling
mcal04714
Thermogenesis
mcal05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110305365 (Smarcd2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110305365 (Smarcd2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110305365 (Smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110305365 (Smarcd2)
03036 Chromosome and associated proteins [BR:
mcal03036
]
110305365 (Smarcd2)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110305365 (Smarcd2)
Chromosome and associated proteins [BR:
mcal03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110305365 (Smarcd2)
PBAF complex
110305365 (Smarcd2)
GBAF(ncBAF) complex
110305365 (Smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
110305365
NCBI-ProteinID:
XP_021032970
Ensembl:
MGP_CAROLIEiJ_G0017317
UniProt:
A0A6P5QVC3
LinkDB
All DBs
Position
11:complement(102167747..102177188)
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AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLSNPALRGPGPSGGMGVPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKADGDNAGTAGTPGGTPAADKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTEPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcctccgctgagccccggcggcggcgcc
gttgccgcggcccttggtgcgccgcctccgcctgcgggacccggaatgctgtccaacccg
gcgctcaggggcccggggccttctggaggcatgggggtaccgggggccgccgccttccgc
cccatgggccccgctggccccgcggcgcagtaccagcgtcctggcatgtcaccaggaagc
aggatgcccatggctggcttgcaggtgggacctcccgccggttccccatttggcacagct
gctccactccgacctggcatgccacctaccatgatggatccattccgaaaacgcctgctt
gtgcctcaggcccagcccccaatgcctgcccagcgccgagggctaaagaggagaaagatg
gcagataaggttctacctcagcgaatccgggagcttgtcccagagtctcaggcatacatg
gatcttttagctttcgagaggaagctggaccagaccatcgctcgcaagcggatggagatt
caagaggccatcaagaagcctctgacgcaaaagcgaaaacttcggatctatatttccaat
acattcagccccagtaaggcggatggagataatgccggaactgcggggacccctggggga
accccggcagcagacaaggtggcctcctgggagcttcgagtggaggggaaactgctggat
gatcctagcaaacagaagaggaagttctcatcattctttaagagccttgtgattgagttg
gacaaggaactgtatgggccggacaatcatctggtggagtggcatcggatgcccaccacg
caggaaacagatggctttcaggtgaaaaggccaggagatcttaatgtcaagtgcactctt
ctgctcatgctggatcatcagcctcctcagtataaactggacccccgcctggcgaggttg
ctgggagtgcacacacagaccagggcggcaatcatgcaggcactgtggctttacatcaaa
cacaaccagctgcaggatggccatgagcgcgagtacatcaactgcaatcgttacttccgc
cagatcttcagttgtggccgactccgtttctccgagattcccatgaagctggctggattg
ctgcagcatccagaccccattgttattaatcatgtcattagtgtggatcctaatgaccaa
aagaagacagcctgctatgacattgatgtagaagttgatgacccactgaaggcccagatg
agcaacttcctggcctctaccaccaaccagcaggagattgcctctcttgatgtcaagatc
catgagaccattgagtccatcaaccagctaaagacccagagggatttcatgctcagcttt
agcaccgagcctcaggacttcatccaggagtggctccgttcccaacgccgagacctcaag
atcatcacagatgtgattggaaaccctgaggaggagagacgagctgctttctaccaccag
ccctgggctcaggaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaattcgcctgacctaa
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integrated database retrieval system
