Mus caroli (Ryukyu mouse): 110305397
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Entry
110305397 CDS
T05910
Symbol
Usp43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110305397 (Usp43)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mcal04121
]
110305397 (Usp43)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110305397 (Usp43)
Peptidases and inhibitors [BR:
mcal01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
110305397 (Usp43)
Ubiquitin system [BR:
mcal04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
110305397 (Usp43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
110305397
NCBI-ProteinID:
XP_021033012
Ensembl:
MGP_CAROLIEiJ_G0016532
UniProt:
A0A6P5QPK9
LinkDB
All DBs
Position
11:complement(62580052..62641623)
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AA seq
1137 aa
AA seq
DB search
MDPGVGDALGEGPPAPRPRRRRSLRRLLNRFLLALGSRSRSGDSPPRPPAQPSPYDGDGE
GGFACAPGPAPASAGSPGPDRPPGSQPQISSGDGARPPGAQGLKNHGNTCFMNAVVQCLS
NTDLLAEFLALGRYRAAPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQG
NSQHDALEFLLWLLDRVHEDLEGSAHGLVSEQLPPEVSKISEDLRPSVAPNSLGPSFVQS
HFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPIPLRQTRFLSVTLVFPTKSQRFLRVGLAV
PILSTVAALRKMVAEEGGVPAEEVILVELYPNGFQRSFFDEEDLNTIAEGDNVYAFQVPP
SPGLGTLSAHPSGLSVSPRLPVRDNQRFSGPLHSENRVVILFCNLVGSGQQASRFGPPFL
IREDRTISWAQLQQCILSKVRCLMRSEVSAQDLGTLFSIRVVGLSLACSYLSPKDSRPLC
HWAVDRALHLRRPGGPPHVKLAVEWDSSVTERLFGSLQEERVQDADSVWRQQQAHQQPSC
TLDECFQSYTKEEQLAQDDAWKCPHCQVLQQGVVKLSLWTLPDILIIHLKRFCQVGERRN
KLSTLVKFPLSGLNMAPHVARRSTNSKAGPGPWSSWKQPICLPTTYPLDFLYDLYAVCNH
HGSLQGGHYTAYCRNSLDGQWYSYDDSTVEALREDEVNTRGAYILFYQKRNSIPPWSASS
SMRGSTSSSLSDHWLMRLGSLNNSTRGSLLSWSSAPCPSVARVPDSPVFTNGVCHQDKGG
VETRPLVRGVGGRSISMKASPASRSRHGPFKTMPLRWSFGHREKRPGASVELVEYLESRR
RPRSTSQSIVPLLTRTAGGDEMSASPRSDGTLPAKSEDSGRAIGQGTTGVPLSSCHLNHH
PALGSLDDSLHTARTRTGNVSQDIRLPKKFDLPLTVMPSVGDEKPARPEGQKMTPWKGSS
QVGSQSSPPSPSTGLLRNFKDNGPGTLPKMKSKAAVEERAPDKDRGQGTFTLLKSVFWKK
EHKRTVRTESSPPAPPISLASDRLSPAMNEQARGSSPALRIRESPAKGLGNHTERDIRSA
PSSLHLPRKASRPPRASTAGTSQRTIPGEQISYGTLQRVKYHTLSLGRKKSLPESSF
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcgtgggggacgcactgggagaggggccgcccgcgccccggccccgccgc
cgccgttccctgcgccgcctgcttaaccgcttcctgctagctctgggcagccgctcccgc
tcgggggactcgccgccccggcccccggcccagcccagtccctacgatggcgatggagaa
gggggctttgcctgcgccccgggcccggcaccagcctctgccgggagtccagggccagat
cgtcctccgggatcccaaccccagatatcttcgggtgacggggcgcgtccgcccggcgct
cagggcttgaagaaccatggcaacacctgtttcatgaacgcggtggtgcagtgtctcagc
aacaccgacctgctggccgagttcctagctctggggcgctaccgggcggcgccaggccgc
gccgaggtcaccgagcagctggcggcgctggtgcgcgcgctctggacgcgcgaatacacg
ccccaactttccgcagagttcaagaatgctgtttctaagtatggctcccagttccaaggc
aattcccagcacgatgccctggaattcctgctctggcttctggatcgtgtccacgaggac
ttggagggctcagctcacgggctggtatctgagcagctgcccccagaagtgagtaagatc
tcagaggacctccggccatctgtagctcctaactccttagggcccagctttgtgcagagc
cactttcaagcacagtacaggtcttccttgacttgtccacactgcctgaaacaaagcaac
acctttgaccctttcctgtgtgtgtcccttcccatccccttgcgccagacgagattcttg
agtgtcactttggtgttccccacaaagagccagcggtttctgcgtgttggcttggccgtg
ccaatcctcagcacagtggcggccttgaggaagatggttgcagaggaaggaggcgtccct
gcagaggaggtgatcttggttgaactgtatcccaatggattccagcggtcattctttgat
gaagaggacctgaataccattgcagagggtgacaatgtgtatgctttccaagtccctccc
tcacctggtctggggacgctctcagcccatccatctggtctgtcagtgtcaccgcgcttg
ccagtccgtgacaaccagcgattctctgggcctctccacagtgagaacagggtggtcatc
ctcttctgtaacctggtgggctcagggcagcaggcgagcaggtttggaccaccgttcctg
attcgggaagatagaacaatctcctgggcccagcttcaacagtgtattctcagcaaggtt
cgatgcctcatgaggagtgaggtctctgcacaggacctggggactctgttctccatccgg
gttgtggggctctccttggcctgcagctacttatctccaaaggacagccggcctctttgc
cactgggcagttgacagggctttgcacctcaggaggccaggaggccctcctcatgttaag
ctggctgtggaatgggatagctctgtcacagagcgcctgtttggaagcctccaggaggaa
cgggtccaggatgcagacagtgtgtggcggcagcagcaggcacaccagcagcccagctgc
accctggacgaatgttttcagtcctataccaaggaggagcagctggcccaggatgatgca
tggaagtgccctcactgccaagtcctccagcagggtgtggtcaagctgagtttgtggact
ctgcccgacatcctgatcatccatctgaaacggttctgtcaggtcggagagcgaaggaac
aagctctccacgctggtgaagttcccactgtctggactcaacatggctccccatgtagca
cggaggagcaccaactccaaggcggggcctggcccttggtcctcctggaagcagccaatc
tgcctccccaccacctacccactggactttctctacgacttgtatgctgtctgcaaccac
catggcagtctgcaaggtgggcattacacagcctattgccggaactccctggacggccag
tggtacagctatgacgacagcacagtggaggccctgcgagaggatgaggtcaacaccagg
ggggcttacatcctgttctaccagaagcggaacagcatccctccctggtcagccagcagc
tccatgagaggttccaccagctcctccttgtctgatcattggctcatgagactcgggagc
ctcaacaacagcacaaggggaagcttgctgtcctggagctctgccccctgcccctccgtg
gcccgggtacccgactctcctgttttcaccaatggtgtctgccaccaggacaagggagga
gttgagaccagacctttggttcggggtgttggtggccgaagtatcagcatgaaggcatct
cctgcttcccgatccaggcatgggcccttcaagaccatgcccctgaggtggtcatttgga
cacagggagaaacgtcccggggcatccgttgaactggtggaatacctagagtccagaaga
agaccccgttctaccagccagtccattgtgccgctcttgactcgtacagctggtggggat
gagatgtcagcatcaccgaggtcagatggcacccttcctgctaaaagtgaagacagtggt
cgagccattgggcaaggaacaactggggtgcccctttcctcatgccacctcaaccaccat
ccagccctggggtctttagatgacagtctgcacactgccaggacacgaacggggaatgta
agtcaggatatcaggctcccaaaaaagtttgatctgcccctcactgtgatgccctcagtg
ggggatgaaaagccagctcgccctgagggccagaagatgaccccttggaagggaagtagc
caggtgggaagccagagtagcccaccttccccctccactggcttgcttagaaactttaag
gacaatgggccaggtaccttacccaagatgaagtctaaggctgccgtggaggaaagggcc
cctgacaaagacaggggacaggggacattcactcttttgaagtctgtgttttggaagaaa
gaacacaagaggactgtcaggaccgagagctcaccaccagcgcccccaatctccctagcg
agtgaccggctgagccctgccatgaatgagcaggcccgaggttcatcccctgccctcagg
attcgagagagcccagccaagggcctgggcaatcacacggagagggacatccgatctgcg
cccagctctctccacctcccccgaaaagccagcaggccccctcgagccagtacagctggc
acctcacaaaggaccattcctggggaacagatttcttatggcaccctgcagagagtgaaa
taccacaccctttccttaggtcgaaagaaatccttacccgagtccagcttctga
DBGET
integrated database retrieval system
