KEGG   Mus caroli (Ryukyu mouse): 110305541
Entry
110305541         CDS       T05910                                 
Symbol
Trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04064  NF-kappa B signaling pathway
mcal04622  RIG-I-like receptor signaling pathway
mcal05164  Influenza A
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    110305541 (Trim25)
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    110305541 (Trim25)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    110305541 (Trim25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mcal04121]
    110305541 (Trim25)
Enzymes [BR:mcal01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     110305541 (Trim25)
Ubiquitin system [BR:mcal04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    110305541 (Trim25)
SSDB
Motif
Pfam: SPRY PRY zf-RING_UBOX zf-C3HC4_4 zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_5 zf-RING_2 RING_XB3-XBAT31 ANCHR-like_BBOX zf-RING_10 zf-RING_6 FTO_CTD U-box Zn_ribbon_4
Other DBs
NCBI-GeneID: 110305541
NCBI-ProteinID: XP_021033214
Ensembl: MGP_CAROLIEiJ_G0016953
UniProt: A0A6P5QRV3
LinkDB
Position
11:84247359..84267723
AA seq 635 aa
MAELNPLAEELSCSVCLELFKEPVTTPCGHNFCMSCLDETWVVQGPPYRCPQCRKVYQVR
PQLQKNTVMCAVVEQFLQAEQARTPVDDWTPPARSAASSAATQVACDHCLTEIAVKTCLV
CMASFCQEHLRPHFDSPAFQDHPLQPPIRDLLRRKCTQHNRLRELFCPEHGECICHICLV
EHKTCSPTPLNQASKDLECKLRNKLAIMHSHINGATKALEDVRSKQQSVQDSMKRKMEQL
RQEYMEMKAVINAAETSSLLKLKEEEKRVYGKFDTIYHVLVKKKTEMQKLKAEVELILDK
GDEFEFLEKAAKLQGESTKPVYIPKIDLDHDLIKGIYQGAMDLKSELKHSIKKLQEKKAE
EHNGSGNKGDQTESTFKPVHPSKKTTQDKKTKKTPVAPSPPSHFSSSKLPTFGAPGQSLD
LKATSPDAAPKASAAQPSSVGVKAKVLENFLTKSRTELLEYFVKVIFDYNTAHNKVSLSD
NYTTASVSNGLQHYRTHPQRFTYCSQVLGLHCYKKGIHYWEVELQKNNFCGVGVCYGSME
RQGPESRLGRNPNSWCVEWFNNKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVIFFAVT
EKVHLMYKFKVDFTEALYPAFWVFSVGTTLSICSK
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggcggagctgaatcctctggccgaggagctgtcgtgctccgtctgcctggagctcttc
aaggaacctgtcaccaccccgtgcggccacaacttctgcatgtcatgcctggatgagacg
tgggtcgtccagggcccgccgtaccggtgcccgcagtgtcgcaaagtgtaccaggtgcgc
ccgcagctgcaaaagaacacggtaatgtgtgccgtggtggagcagttcctgcaagccgag
caggcgcggaccccggtggacgactggacgccccctgcccgctccgctgcctccagcgca
gccacccaggtggcctgcgaccactgcctgacggagatcgcagtgaagacgtgcctcgtg
tgcatggcctctttctgccaggagcacttgaggcctcacttcgacagtccggccttccag
gatcaccccctgcagccgcccatccgtgaccttctgcgccgcaaatgtacccagcacaac
cgccttcgggaactgttttgtcccgagcatggcgagtgcatctgccatatctgcttggta
gagcacaagacctgctcccctacgcccctaaaccaagccagcaaggacctggagtgcaaa
ctgaggaataaactcgctatcatgcacagccacatcaatggggcaaccaaagcattggag
gatgtgagatccaagcagcagagtgtgcaggattctatgaagaggaagatggaacagctg
agacaggagtatatggaaatgaaggctgtcatcaatgcagcagagaccagctccttgctc
aagttgaaggaggaggagaagagagtctatggaaaattcgacaccatctaccacgttctt
gtcaagaagaagactgagatgcagaaactgaaggcagaggttgagctcatcctggacaaa
ggggatgagtttgagtttctggagaaagctgcaaaattgcaaggagagtcaacaaaacca
gtctacatccctaagatagatctggatcatgatttgataaagggaatctaccagggtgcg
atggacctcaagagtgagctgaagcactccattaagaagctacaggagaagaaggctgag
gagcacaatggctcaggtaacaagggagaccagacagagtccacttttaaacccgtacac
ccttcgaagaagaccactcaagacaagaagaccaagaaaacccctgttgctcccagccct
ccatcccacttctcatccagcaagttgcccacctttggagctcctggccaatcactggat
ttgaaagcaacttcccctgatgccgcacccaaagccagtgctgcacagccaagctctgta
ggagtcaaggctaaggtgctagaaaacttcttaaccaagtccagaacggagcttctggag
tatttcgtgaaagtcatcttcgattacaataccgcccacaacaaagtgtctctgtcagac
aactacaccaccgcctctgtgtccaacgggctccagcactaccggacccatccccagagg
ttcacctactgctctcaggtcctggggctgcactgctacaagaaaggcattcactactgg
gaggtggaactccagaagaacaacttctgcggtgtaggcgtctgctacggcagcatggaa
cggcagggccccgagagccggctgggccgcaaccccaactcatggtgtgtggagtggttc
aataacaagatctccgcctggcacaacaacgtggagaagactctgccctccaccaaggcc
actcgagttggcgtgctgctcaactgtgaccacggctttgtcattttctttgcggtcacc
gaaaaggtgcacctgatgtataaattcaaggtggacttcactgaagctctgtacccagcc
ttctgggtgttctcagtgggtaccaccctctctatctgttccaagtag

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