Mus caroli (Ryukyu mouse): 110305548
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Entry
110305548 CDS
T05910
Symbol
Srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04152
AMPK signaling pathway
mcal04910
Insulin signaling pathway
mcal04931
Insulin resistance
mcal04932
Non-alcoholic fatty liver disease
mcal04936
Alcoholic liver disease
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09130 Environmental Information Processing
09132 Signal transduction
04152 AMPK signaling pathway
110305548 (Srebf1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110305548 (Srebf1)
09160 Human Diseases
09167 Endocrine and metabolic disease
04936 Alcoholic liver disease
110305548 (Srebf1)
04932 Non-alcoholic fatty liver disease
110305548 (Srebf1)
04931 Insulin resistance
110305548 (Srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mcal03000
]
110305548 (Srebf1)
04131 Membrane trafficking [BR:
mcal04131
]
110305548 (Srebf1)
Transcription factors [BR:
mcal03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
110305548 (Srebf1)
Membrane trafficking [BR:
mcal04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
110305548 (Srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
110305548 (Srebf1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
bHLH_IRO3
GIP4
Motif
Other DBs
NCBI-GeneID:
110305548
NCBI-ProteinID:
XP_021033223
Ensembl:
MGP_CAROLIEiJ_G0016451
UniProt:
A0A6P5QQ64
LinkDB
All DBs
Position
11:complement(55026241..55048749)
Genome browser
AA seq
1134 aa
AA seq
DB search
MDELAFGEAALEQTLAEMCELDTAVLNDIEDMLQLINNQDSDFPGLFDAPYAGGETGDTG
PSSPGANSPESFSSASLASSLEAFLGGPKVAPAPLSPPPSAPAALKMYPSVPPFSPGPGI
KEEPVPLTILQPAAPQPSPGTLLPPSFPAPPVQLSPAPVLGYSSLPSGFSGTLPGNTQQP
PSSLPLAPAPGVLPTPALHTQVQSLASQQPLPASAAPRTNTVTSQVQQVPVVLQPHFIKA
DSLLLTAVKTDAGATVKTAGISTLAPGTAVQAGPLQTLVSGGTILATVPLVVDTDKLPIH
RLAAGSKALGSAQSRGEKRTAHNAIEKRYRSSINDKIVELKDLVVGTEAKLNKSAVLRKA
IDYIRFLQHSNQKLKQENLTLRSAHKSKSLKDLVSACGSGGGTDMSMEGMKPEMMETLTP
PPSDAGSPSQSSPLSFGSRGSSSGGSDSEPDSPAFEDSQVKAQRLPSHSRGMLDRSRLAL
CVLAFLCLTCNPLASLFGWGILTSSDATGTHRSSGRSMLEAESRDGSNWIQWLLPPLVWL
ANGLLVLACLALLFVYGEPVTRPHSGPAVHFWRHRKQADLDLARGDFAQAAQQLWLALQA
LGRPLPTSNLDLACSLLWNLIRHLLQRLWVGRWLAGQAGGLLRDRGLRKDARASARDAAV
VYHKLHQLHAMGKYTGGHLAASNLALSALNLAECAGDAISMATLAEIYVAAALRVKTSLP
RALHFLTRFFLSSARQACLAQSGSVPLAMQWLCHPVGHRFFVDGDWAVHGAPPESLYSVA
GNPVDPLAQVTRLFREHLLERALNCIAQPSPGAADGDREFSDALGYLQLLNSCSDAAGAP
ACSFSVSSSMAATTGTDPVAKWWASLTAVGIHWLRRDEEAAERLYPLVEHIPQVLQDTER
PLPRAALYSFKAARALLDHRKVESSPASLAICEKASGYLRDSLASTPTGSSIDKAMQLLL
CDLLLVARTSLWQRQQSPASAQVTHGTSNGPQASALELRGFQHDLSSLRRLAQSFRPAMR
RVFLHEATARLMAGASPARTHQLLDRSLRRRAGSSGKGGTAAELEPRPTWREHTEALLLA
SCYLPPAFLSAPGQRMSMLAEAARTVEKLGDHRLLLDCQQMLLRLGGGTTVTSS
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctggccttcggtgaggcggctctggaacagacactggccgagatgtgcgaa
ctggatacggcggttttgaacgacatcgaagacatgctccagctcatcaacaaccaagac
agtgacttcccaggcctgtttgatgccccctatgctgggggtgaaacaggagacacaggc
cccagcagcccaggggccaactctcctgagagcttctcttctgcttctctggcctcctct
ctggaagccttcctgggaggacccaaggtggcacctgcacccttgtcccctccaccatcg
gcacccgctgctttaaagatgtacccgtccgtgccccccttctcccctgggcctgggatc
aaagaggagccagtgccactcaccatcctacagcccgcagcgccacagccgtcaccgggg
accctcctgcctccgagcttccccgcaccacccgtacagctcagtcctgctcccgtgctg
gggtactcgagcctgccttcaggcttctcagggacccttcctggaaacactcagcagcca
ccatctagcctgccgctggcccctgcaccaggagtcttgcccacccccgccctgcacacc
caggtccaaagcttggcctcccagcagccgctgccagcctcagcagcccctagaacaaac
actgtgacctcacaggtccagcaggtcccagttgtactgcagccacacttcatcaaggca
gactcactgctgctgacagctgtgaagacagatgcaggagccaccgtgaagactgcaggc
atcagcaccctggctcctggcacagctgtgcaggctggtcccctgcagactctggtgagt
ggagggaccatcttggccacagtaccactggttgtggacacagacaaactgcccatccac
cgactcgcagctggcagcaaggccctaggctcagctcagagccgtggtgagaagcgcaca
gcccacaatgccattgagaagcgctaccggtcctctatcaatgacaagattgtggagctc
aaggacctggtggtgggcactgaggcaaagctgaataaatctgctgtcttgcgcaaggcc
atcgactacatccgcttcttgcagcacagcaaccagaagctcaagcaggagaacctgacc
ctacgaagtgcacacaaaagcaaatcactgaaggacctggtgtcagcttgtggcagtgga
ggaggcacagatatgtctatggagggcatgaaacctgaaatgatggagacgctgactcct
ccaccctcagacgccggctcaccctcccagagtagccccttgtcctttggcagcagaggt
agcagcagtggtggcagtgattctgagcccgacagtccagcctttgaggatagccaggtc
aaagcccagcggctgccttcacacagccgaggcatgctggaccgctcccgcctggccctg
tgtgtactggcctttctgtgtctgacctgcaatcctttggcctcgcttttcggctggggc
attctcacttcctctgatgctacgggtacacaccgtagttctgggcgcagcatgctagag
gcagagagcagagatggctctaattggatccagtggttgctgccacccctagtctggctg
gccaatggactactagtgttggcctgcttggctcttctctttgtctatggggaacctgtg
actaggccacactctggcccggctgtccacttctggagacatcgcaaacaagctgacctg
gatttggcccggggagatttcgcccaggctgctcaacagctgtggctggccctacaagcg
ctgggccggcccctgcccacctcaaacctggatctggcctgcagcctgctttggaacctc
atccgccacctgctccagcgtctctgggtgggccgctggctggcaggccaggccgggggc
ctgctgagagaccgtggactgaggaaggatgcccgtgccagtgcccgggatgcggctgtt
gtctaccataagctgcaccagctgcatgccatgggcaagtacacaggaggacatcttgct
gcttctaacctggcactaagtgccctcaacctggctgagtgtgcaggagatgctatatcc
atggcaacactggcagagatctatgtggcagcggccctgagggtcaaaaccagcctccca
agagccttgcacttcttgacacgtttcttcctgagcagcgcccgccaggcctgcctagca
cagagcggctcggtgcctcttgccatgcagtggctctgccaccctgtaggtcaccgtttc
ttcgtggacggggactgggctgtgcacggtgcccccccggagagcctgtacagcgtggct
gggaacccagtggatccgctggcccaggtgactcggctattccgtgaacatcttctagag
cgagcgttgaactgtattgctcagcccagcccaggggcagctgacggagacagggagttc
tcagatgcccttggatatctgcagttgctaaatagctgttctgatgctgccggggctcct
gcgtgcagtttctctgtcagctccagcatggctgccaccactggcacagacccagtggcc
aagtggtgggcctcactgacagctgtggggatccactggctgaggcgagatgaagaggca
gctgagcgcttgtacccactggtagagcatatcccccaggtgctgcaggacactgagaga
cccctgcccagggcagctctgtactccttcaaggctgcccgggctctgctggaccacaga
aaggtggaatctagcccagccagcctggccatctgtgagaaggccagtgggtacctgcgg
gacagcttagcctctacaccaactggcagttccattgacaaggccatgcagctgctcctg
tgtgatctacttcttgtggcccgcaccagtctctggcagcggcagcagtcaccagcttca
gcccaggtaactcacggtaccagcaatggaccccaggcctctgccctggagctgcgtggt
ttccaacatgacctgagcagcctgcggcggttggcacagagcttccggcctgctatgagg
agggtattcctacacgaggccacagctcggctgatggcaggagcaagtcctgcccggaca
caccagctcctggaccgcagtctgaggaggagggcaggctccagtggcaaaggaggcact
gcagctgagctggagccacgacccacatggcgggagcacacggaggccctgctgttggca
tcctgctatctgccccctgccttcctgtcggctcctgggcagcgaatgagcatgctggct
gaggcggcacgcaccgtagagaagcttggcgatcaccggctactgctggactgccagcag
atgctcctgcgcctgggcggcgggaccaccgtcacttccagctag
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integrated database retrieval system
