Mus caroli (Ryukyu mouse): 110305729
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Entry
110305729 CDS
T05910
Symbol
Sema6d
Name
(RefSeq) semaphorin-6D isoform X3
KO
K06842
semaphorin 6
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110305729 (Sema6d)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
110305729
NCBI-ProteinID:
XP_021033459
Ensembl:
MGP_CAROLIEiJ_G0024220
UniProt:
A0A6P5QQU6
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Position
2:117371005..117429129
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AA seq
1073 aa
AA seq
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MGFFLLWFCVLFLLVSRLRAVSFPEDDEPLNTVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEIPQTEVIPSKKLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYRLRTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIQINGIPTVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDDTLAFIKSHPLMDSAVPPIADEPWFTKTRVRYR
LTAIEVDRSAGPYQNYTVIFVGSEAGVVLKVLAKTSPFSLNDSVLLEEIEAYNPAKCSAE
SEEDRKVVSLQLDKDHHALYVAFSSCVVRIPLSRCERYGSCKKSCIASRDPYCGWLSQGV
CERVTLGMLAGGYEQDTEYGNTAHLGDCHESLPPSTTPDYKIFGGPTSDMEVSSSSVTTV
ASSPEITSKVIDTWRPKLTSSRKFVVQDDPNTSDFTDTISGIPKGVRWEVQSGESNQMVH
MNVLITCVFAAFVLGAFIAGVAVYCYRDMFMRKNRKIHKDAESAQSCTDSSGSFAKLNGL
FDSPVKEYQQNIDSPKLYSNLLTSRKELPPNTDTKSMAVEHRGQPPELAALPTPESTPVL
HQKTLQAMKSHSEKAHGHGASRKEHPQFFPSSPPPHSPLSHGHIPSAIVLPNATHDYNTS
FSNSNAHKAEKKLQSMDHPLTKSSSKREHRRSVDSRNTLNDLLKHLNDPNSNPKAILGEI
HMAHQTLMLDPVGPMAEVPPKVPNREASLYSPPSTLPRNSPTKRVDVPTTPGVPMTSLER
QRGYHKNSSQRHSISAVPKNLNSPNGVLLSRQPSMNRGGYMPTPTGAKVDYIQGTPVSVH
LQPSLSRQSSYTSNGTLPRTGLKRTPSLKPDVPPKPSFVPQTTSVRPLNKYTY
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggggttctttctgctttggttctgcgtgctgttccttctggtctccaggttacgagcg
gtcagcttcccagaagatgatgagccccttaacacggttgactatcactattcaaggcaa
tatccggtttttagaggacgcccttcaggcaacgaatcgcagcacaggctggactttcag
ctgatgttgaaaattcgagacacactttatattgctggcagggatcaagtctatacagtg
aacttaaatgaaatcccccaaacagaggtgataccgagcaagaagctgacatggaggtcc
agacaacaggatcgagaaaattgtgctatgaaaggcaagcataaagatgaatgccacaac
ttcatcaaagtctttgtcccaagaaatgatgagatggtttttgtctgtggtaccaatgct
ttcaacccgatgtgcagatactataggttgagaaccttagagtatgatggggaagaaatt
agtggcctggcacgatgcccgtttgatgcccgacaaaccaatgtcgccctctttgctgat
ggaaaactctattctgccacagtggctgatttcctggccagtgatgctgtcatttacaga
agcatgggagatggatctgcccttcgcacaataaaatacgattccaaatggatcaaagaa
ccacacttccttcatgccatagaatatggaaactacgtctatttcttcttcagagaaatc
gccgtggagcataataacttaggcaaggctgtgtattcccgtgtggctcgcatttgtaaa
aacgacatgggtggctcacagcgggtcctggagaaacactggacttccttccttaaggct
cggctgaactgctccgttcctggagattcctttttctacttcgacgtcctgcagtctata
acagacataatccaaatcaatggcatccccactgtggttggggtcttcaccacacagctc
aacagcattcctggttctgcagtctgtgcctttagcatggacgacattgagaaagtgttc
aaagggcggttcaaagagcagaaaaccccagactctgtttggacagcggttcccgaagac
aaagtaccaaaaccaaggcctggctgttgtgccaaacacggcctcgcagaagcttacaag
acctccatcgactttccagatgataccctggctttcatcaagtcccacccgctgatggac
tctgccgtcccacccattgccgatgagccctggttcacaaagacacgggtcaggtacagg
ttgacagccatcgaagtggaccgttcagcggggccataccaaaactacacagtcatcttt
gttggctctgaagctggcgtggtacttaaagttttggcaaagaccagtcctttctctctg
aatgacagtgtgttactcgaagagattgaagcttataacccagccaagtgcagcgccgag
agtgaggaggacagaaaggtggtctcattacagctggacaaggatcaccatgctttatac
gtggccttctctagctgcgtggtccgcatcccactcagccgctgtgagcgctacggatcg
tgtaaaaagtcttgcattgcatctcgtgacccgtactgtggttggttaagccagggagtt
tgtgagagagtgaccctcgggatgctcgctggaggatatgaacaggacacggagtatggc
aacacggcccacctaggggactgccacgaaagtttgcctccttcaactacaccagattac
aaaatatttggcggtccaacatctgacatggaggtatcctcatcttctgttaccactgtg
gcaagtagcccagaaattacatctaaagtgattgatacctggagacctaaactgacgagc
tcccggaaatttgtagttcaagatgacccaaacacttctgattttactgatactatatca
ggtatcccaaagggtgtacggtgggaagtccagtctggagaatccaaccagatggtccac
atgaatgtcctcatcacctgcgtgtttgccgcttttgtcttgggcgcgttcatcgcagga
gtggccgtatactgctaccgtgacatgttcatgcggaagaacagaaagatccataaagac
gcagaatccgcccagtcgtgtacagactccagcggaagctttgccaagctgaatggcctc
tttgacagccccgtcaaggaataccagcagaacattgattctcccaaactctacagcaac
ctgctgaccagtcggaaggaactgccaccaaacacggatacaaagtccatggccgtggag
cacagaggccagcctcccgagctggctgctctccccacgccggaatccacacctgtcctc
caccagaagaccctgcaggccatgaagagccactctgagaaggcccacggccacggtgct
tcaaggaaagaacacccccagttttttccttctagtcctccaccccattccccattgagt
cacgggcatatccccagtgccatcgttcttccaaacgccactcacgactacaatacatcc
ttctcaaactcgaatgcccacaaagccgaaaagaagcttcagagcatggatcaccctctt
acgaagtcatccagtaagcgggagcaccggcggtctgtggattccaggaataccctcaat
gatctcctgaagcatctaaatgacccaaacagtaaccccaaagccatcctgggagagatc
catatggctcatcaaaccctcatgctggacccagtgggaccaatggctgaggtcccaccc
aaggtccctaaccgggaggcatctctgtactcccctccctccacactccccagaaatagt
ccaaccaagagagtagatgtccccaccactcctggggtgccaatgacttctctggaaaga
caaaggggttatcacaaaaattcctcccagaggcactctatatctgccgtgcctaaaaac
ttaaactcaccaaatggtgttttgttatctagacagccgagtatgaaccgtggaggctat
atgcccaccccaacaggggcgaaggtggactatattcaggggacaccggtgagtgttcat
ctacagccctccctctccagacagagcagctataccagtaatggcaccctccccaggacg
ggactaaagaggacaccatccttaaaacctgatgtgccaccaaagccttcctttgttccg
caaaccacatctgtcagaccactgaacaagtatacgtactag
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