Mus caroli (Ryukyu mouse): 110305768
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Entry
110305768 CDS
T05910
Symbol
Psmc5
Name
(RefSeq) 26S proteasome regulatory subunit 8
KO
K03066
26S proteasome regulatory subunit T6
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03050
Proteasome
mcal05010
Alzheimer disease
mcal05012
Parkinson disease
mcal05014
Amyotrophic lateral sclerosis
mcal05016
Huntington disease
mcal05017
Spinocerebellar ataxia
mcal05020
Prion disease
mcal05022
Pathways of neurodegeneration - multiple diseases
mcal05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110305768 (Psmc5)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110305768 (Psmc5)
09164 Neurodegenerative disease
05010 Alzheimer disease
110305768 (Psmc5)
05012 Parkinson disease
110305768 (Psmc5)
05014 Amyotrophic lateral sclerosis
110305768 (Psmc5)
05016 Huntington disease
110305768 (Psmc5)
05017 Spinocerebellar ataxia
110305768 (Psmc5)
05020 Prion disease
110305768 (Psmc5)
05022 Pathways of neurodegeneration - multiple diseases
110305768 (Psmc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mcal03051
]
110305768 (Psmc5)
Proteasome [BR:
mcal03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
110305768 (Psmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_5
AAA_16
AAA_22
AAA_lid_PRS2_C
nSTAND3
PRS7_OB
RuvB_N
TIP49
AAA_18
AAA_28
Mg_chelatase
AAA_3
AAA_33
NPHP3_N
AAA_14
Parvo_NS1
ATPase
PhoH
AAA_17
FapA
IstB_IS21
AAA_24
AAA_7
AAA_25
DUF815
DUF7006
Sigma54_activat
ABC_tran
bpMoxR
DUF5906
RNA_helicase
Zeta_toxin
AAA_19
TsaE
AAA_11
Prominin
HR1
Motif
Other DBs
NCBI-GeneID:
110305768
NCBI-ProteinID:
XP_021033527
Ensembl:
MGP_CAROLIEiJ_G0017316
UniProt:
A0A6P5QQZ6
LinkDB
All DBs
Position
11:102160731..102167689
Genome browser
AA seq
416 aa
AA seq
DB search
MPAVPAERGKMALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRN
ELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTP
NCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVK
HPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARM
VRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIK
VIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAEL
MPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgccggcggtccctgccgagagagggaagatggcgcttgatgggccagagcagatggaa
ctggaagaggggaaggcaggcagtggactccgtcaatattatctgtccaagattgaagaa
ctccagttgattgtaaatgataaaagccagaatctccgtagactgcaggcacagaggaat
gagctgaatgcaaaagttcgcctgttgcgggaggagctgcagctgttgcaggaacagggc
tcctacgttggagaagtcgtgagggccatggataagaaaaaagtgttggtcaaggtccat
cctgagggcaaatttgttgttgatgtggacaagaacattgatatcaatgatgtgacgccc
aattgtcgggtcgctctaagaaatgacagctacactctgcataagatcttacctaacaag
gtggaccctttggtgtcactaatgatggtggagaaggtgccagattcaacctacgagatg
attggcggcctggacaagcagatcaaggagataaaagaagtgatcgagctgcccgtgaag
caccccgagctctttgaagcactgggcatcgcacagccaaagggagtcctgctctacgga
cccccaggcactgggaagacattgttggcccgcgctgtggctcatcatacagactgtacc
tttattcgtgtctctggctctgaactggtacagaaattcatcggggaaggggcaagaatg
gtgagggagctgtttgtcatggcccgagaacatgctccatccatcatcttcatggacgag
attgactctattggctcctcacggctggaggggggctctggaggcgacagtgaggtacag
cgcacgatgctggaactgctcaatcagctggatggctttgaggccaccaagaatatcaag
gttatcatggctaccaataggattgacatcctggactctgccctgcttcgtcctgggagg
attgacagaaaaattgaattcccaccccccaacgaggaggcccggctggacattttgaaa
atccactctcggaaaatgaacttgaccagggggatcaacctgaggaaaattgctgagttg
atgccgggagcttcaggggctgaagtgaagggtgtgtgcacagaagctggcatgtacgcc
ctgagggaacggcgtgtccacgttactcaggaggactttgagatggcagtagctaaggtc
atgcaaaaggatagtgagaaaaacatgtccatcaagaagctatggaagtga
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integrated database retrieval system
