Mus caroli (Ryukyu mouse): 110306301
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Entry
110306301 CDS
T05910
Symbol
Pkd1l1
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mcal03037
]
110306301 (Pkd1l1)
04040 Ion channels [BR:
mcal04040
]
110306301 (Pkd1l1)
Cilium and associated proteins [BR:
mcal03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
110306301 (Pkd1l1)
Ion channels [BR:
mcal04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110306301 (Pkd1l1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
Polycystin_dom
PKD
PLAT
PKD_4
GPS
PKD_channel
Motif
Other DBs
NCBI-GeneID:
110306301
NCBI-ProteinID:
XP_021034124
Ensembl:
MGP_CAROLIEiJ_G0016087
UniProt:
A0A6P5QU75
LinkDB
All DBs
Position
11:complement(5536893..5691386)
Genome browser
AA seq
2694 aa
AA seq
DB search
MASGIGGTDESEPPCNVLNTSSEERLSFINGEPQAPPNWDEGTNSFSNPRPGISHTCNLS
ASWYHPESSSPLTQHPPRAILVTQPENAGHFAFCCFPETDAQAPPALGIRVHVASGTALC
LLLDFGDNCGAQMRLCTLTGAATVTGYHQYRKGIFYLLIHVQISFESYREKQYLNSFLNL
IYSISSQISHPIMTVLEVLTPTSVKKHIICPFXLFFPEGVYKLKAVVHDFHRAEELGPYY
MDVGHGNVSVFMNSSSIHDSEALSFTDSLPQQRGTVVVHCFSSISSYNVSFISQTQVASS
QAWCGVTVGYKMQSVSVYTNGTVFAADTNITFVAITEETIPLEFAWYFGENPPVMTTSRS
IRRRLSIPQWYHVKVKATSRIGSVVSEPHLIRVQKRIMANRLVSTASALVNANVSFECRL
NFGTDVAYLWNFGDDTIELGSSSSSHVYSREGEFTVEVLAFNNVSSATLRKQLFIVREPC
QPPPVKNMGPAKVQIWRSQPLRLGVTFEAAILCNISQGLSYTWSFVSAEMTTVTLPAAVN
TRRQTIMLPSYTLECGNYTAIAKVQIKGSMVYSNYCVGVEVRARAPVSVISEGTHIFIST
ATSTFIILRGAQSYDPDNPGAALRYHWTCTAASSPRWPCFDNSTSYQVDMQAPAISFPAK
WLSECCDQFLVTLTVSSRGQNSSQALMFLSTRPDLAFRFVHISWVNFRDISVNWNEEVSL
LAVCEDCGDIPDLTYSWDLFLVNATEKSAVEDRAQRYIDDKSTPVRGIVEELGTGVWGDL
NTDMPPKGPLQHGTVGLLGALALGTSLKSSKSDLPSNLRAPLTPHSPEPSPMPLGWTALS
NLGSISAESTAGGHHVPASGAVAGSGEPVEEYSSLSSLAEEALMTNSPAGSWPSPSSSTD
FDDFEAYYTDIQEAVLSLGRRPPGTSTNFQEAGPSLSAEESTSYGDNLLGPFLHTGRAKP
TLMIDWPKALVSQAVFHGYTTSGIMGPAVTIKPFSLSSGKTYVLQASVASKDVLLGKAQL
YLRVNQAPQDMSCQVRPHHGMEAYTIFSVFCMSGKPDFHYEFRYRIGNTSSHTLYRGQDT
QHYFLLPAGDSSDNYKVIVSTEITDGQGSKVQPCTVTVTVLPRYHGNDCCDKDLYNSTLE
NLSTLQLAGSYMEIRNYITMITEILSRLYMESRNTSLCGQWSQIQDVLISSACKVPYTDQ
VMALNMIKSLVSFSQKVGLTSAMCIFKYTKMFLAQGQFSRRLLADKKLRVEFVLLISGVW
EAAKEDARDGNYLQEEGMKIISDMLLACLSDKHQIHVSTGQMEFQTLLHRSPQSSIQNLG
FVQVHVPSDLASLHSTTQEETQGSCYISQLMFFMKSPYLGGQVPGQVGGVMIPRLYSCKS
RRPILRGQLETPVTMEFGEEDYLHKRNPAMFVLLRDEVNVHRFTGLPENSQESLQILIKF
SKPVTRPFPIILLVRFSEKATPSDFLVKRVYFWDEQTVQMYVPAAPWKGANVGYLSLLDA
DYDRKPPNKYLAGAVNYTVHFQLIQCVFWDKTEWRSESYPQPGSSPEKVNCSYHHLAPVS
VLRRKLNATLEVSSISEFQSHPHNLLPGIFSAFLLVLYGILVSKSRCVDCHEKKNPGFIF
LEEDTLPGYQLYAVVIDTGFRSPVRFTSKVFIVLCGENGCSETKELCCPEKPLFGRNSRH
TFILSIPNQLGPLQKIRLWHDSSGPCPCWFISHVMVKELCSGQAWFFSAQCWLAVSKLGG
RVLREFFCLSHGLGFWKLFYSKFTEYLEDFHIWLSLYSQPPSRSYLHTQRLAVSFCLLCV
YSCLTALVTVRDHQQHPLDVEPTAITLEPFCMALLCTLLACPVAQLLSLLFRCSKEARGH
LQASTQWPLRGVKTETPQGHDSSGRPDSRQPSPHPTSDLLPWTEQARRIAASSSGVVWSP
FPMEACSDKHHDLREKSHYSPPSAQAPGSGFEELGSQKSRVCLLWSSSVAWAISGSASLA
CGLGTGFLGYRFVPVQCMWWLYLLLLSLVCCAFITQPLMICLAALVFAWKRKHDNEFFTE
SLQDATKGLDLELEEHSRTRVPLSPISYSPDTAEEAERVLATRQRERHLRWAQTPSRAKL
RVTRERLRRESIMQAALRDMTMHSIMLLLLLFIAYGRFCPGEYSLNHAIRKAFIRKANHS
LGDLSSTEDWWDWTLSTLLHELYPERTSARAWGAQPGALGGQCHLIGPLVVKQLKISAGT
ACMPPRPFSELVEDVLPMHSNDLDLENRNVSPGSPETCGVKKESYMHSLGRTRHEAHAAL
TALRASKWIDHSTRAMSVHFTLYNPPTRLFTSVILGTECLPSGGLVPSFLVESVRIFYSD
SALKYLLMLSELLFLVFNMIHLCFQLWGMTTKGILSYWRKPRHWLELSMVGVALAYYAAS
GHLTTLAANITDQFHKGLYQRLVDISLIVSWHQRARCLQGILLFLWMLKYVHLLSSLSTM
TPFSAVTCFPLFRVLLVGALLLAAHYHSRWFLLFTGTLSRGTSTEAFPGLLLRFPARSKK
DSWHSCLKSDHGAMHCYYGTLFLLLATLGFRMLRATFLTVFQNRKSSHRKSLVTLKDIAV
YTWHKVLTLLGLETTLEETEVATDHIYYLDEFSSLLDELLMKIDGLSDSLEFSILENQWR
RALESRAGDSPPVGISEYQATGVENPGLRDDESHRLKGCAQETRNSNSAQAEET
NT seq
8085 nt
NT seq
+upstream
nt +downstream
nt
atggcctctggaattggaggtacagatgaatctgagccgccatgtaatgttctgaacaca
agtagtgaagaaaggctaagctttattaacggagaaccacaagctcctcccaattgggat
gaaggtactaacagcttctcaaaccctcgtcctggcatttctcacacctgcaacctctct
gcatcctggtatcatcctgagagttccagtcctctcactcagcatcctcccagggccatc
ttggtgacacagcctgaaaatgctgggcactttgccttctgctgcttcccagaaacagat
gctcaggcacctccagctctgggaatccgtgttcacgtggcttccggaacagctctttgt
ctgctgctggactttggggacaattgtggagctcagatgagactgtgtacattgacaggt
gcagctactgtaactggctaccatcagtacaggaaaggcatattctatttattaatccat
gtgcagatctcttttgagtcctaccgtgagaagcaatatttgaattcttttttaaatctc
atttatagtatcagttcacagattagtcatcctattatgactgtcctggaggtgttaact
cctacatctgttaaaaaacacatcatatgtccattttgacttttttttccagaaggagtc
tataagctcaaggctgttgtccatgactttcatagagccgaggaactggggccctattat
atggacgttggtcatgggaatgtgtctgtcttcatgaattccagctctatccatgatagt
gaagctctttcctttactgactccctcccacagcagagaggcacagtcgtggtgcattgt
ttttcatccatttcttcatacaatgtgtcctttatttctcagacccaagtggccagcagc
caggcctggtgtggtgtgactgtcgggtataagatgcaatccgtgtctgtctataccaat
ggaactgtgtttgctgcagacacaaacatcacatttgtggctattaccgaggaaactata
cccctggagttcgcttggtattttggagaaaacccaccagtgatgacaacttccagaagc
attagaagaaggctgagcatccctcagtggtaccatgtgaaggtcaaggccaccagcagg
attggcagtgtggtctctgaaccccacctcatcagggtgcagaagagaatcatggccaat
cggctcgtgtctactgcctcagccctggtaaatgccaatgtgtcctttgagtgcaggctc
aactttggcactgatgtagcctacctttggaactttggagatgacaccattgagttgggc
agcagctcctccagccatgtctacagcagggagggggagtttacagttgaagtccttgcc
ttcaataatgtcagctccgccaccctaagaaagcagcttttcatcgtgcgggagccttgc
cagccacccccagtgaagaacatggggcctgcgaaggtgcagatatggagatctcagccc
ctgagactaggagtgacatttgaagctgccatcctctgtaacatttcccaagggctttcc
tacacctggagctttgtgagtgctgagatgaccactgtcaccctccctgctgctgtcaac
acccgcagacagaccatcatgctcccaagctacacactggagtgtgggaactacaccgcc
atcgccaaggttcagatcaagggaagcatggtgtatagcaactactgtgttggtgtagaa
gttcgagctagggcacctgtcagcgtcatctctgaaggcacacacatcttcatctccacg
gccacctcaaccttcatcatcctcagaggggcccagtcctatgaccctgacaacccaggg
gctgctctcaggtatcactggacttgcacagcggccagctcaccaaggtggccctgcttt
gataactctacttcataccaagtggacatgcaagctcctgccatttccttcccagcaaaa
tggctcagtgagtgctgtgaccagttccttgtgacactgacagtctctagcaggggacag
aactcatcacaggccttgatgttcctgtctacccgtcctgacctggccttcagattcgtc
cacatctcatgggtcaactttagagacatctctgtgaactggaatgaagaagtgtctctc
ctagctgtgtgtgaagactgtggagatatcccagacctcacgtattcctgggacctcttc
ctagtcaatgcaacagagaagagtgcagtggaagatagggcacagagatacattgatgat
aagtctactccagtcaggggcattgttgaggagttagggacaggagtgtggggtgaccta
aacacagatatgccacccaaaggcccactgcagcatggtactgtggggctgctaggtgcc
ttggcacttgggaccagtctgaagtcatctaagtccgatctgccatcaaatctgagagca
ccactgacaccacactcaccggagccttcacccatgcccctgggctggacagctctttcc
aacctgggaagcatttctgctgagtccacagctggtggccaccacgttcccgcttcaggg
gctgtggcaggctcaggggagcctgtggaggagtatagctcactgagttccctggctgag
gaagccctgatgacgaacagccctgcgggaagctggccctcccccagctcttccactgac
tttgatgattttgaagcctattataccgacatccaagaagcagtgctatccctaggaaga
cgcccaccagggaccagtacaaacttccaggaagcaggaccaagcctgagtgctgaggag
agtaccagttatggggacaacctgctgggccctttcctccacacaggtagagcaaagcca
actctcatgatcgactggcccaaggccctggtcagccaagctgtcttccatggctacacc
acatcaggtatcatgggaccagctgtgacaataaaaccattctcactgagcagtggtaag
acctatgtcttacaagcttctgtagcttcaaaggatgtcttactgggcaaggctcagctc
tacttaagggtcaaccaagctccgcaggacatgtcttgtcaggtgcgaccccaccatggt
atggaggcatataccatcttcagtgtcttctgcatgtcagggaaaccggactttcattat
gaatttcgttaccggataggaaacacttcctcacacaccctgtaccgtggacaagacacc
cagcattattttttattgccagctggtgattcttcagacaattacaaagtcattgtttca
actgagatcacagatggccaaggctccaaggtgcagccatgcactgtgacagtgactgtg
ctaccccgttatcatggaaatgactgctgtgacaaggacttatataactccactctggaa
aacctgtctactctccagctggcaggaagttacatggaaatcaggaactacattaccatg
atcactgagatcctgagccgcttgtatatggagagcagaaacacttctttgtgtggtcag
tggtcacaaatacaggatgtattaatatcttcagcatgcaaagtaccttatacagatcag
gtaatggccctgaacatgattaaatcgcttgtttctttctcacagaaggttggcttgacg
agtgccatgtgcatcttcaaatacaccaagatgttccttgctcaaggccagttctccagg
aggttgcttgccgacaaaaaactaagagttgaatttgtccttctcatctctggagtctgg
gaagctgccaaagaggatgcgagggatgggaactatttgcaggaagaaggcatgaagatc
atctctgacatgttactagcctgtctctcagacaagcatcagattcacgtaagcactggg
cagatggagttccagacccttctccatcgtagccctcagagctctatccagaacctaggc
ttcgtccaggtacatgtccccagcgacctggcctccttgcacagtactactcaagaggaa
acacaaggctcatgctatatcagtcagctcatgttcttcatgaagagtccttatctaggg
ggacaagttcctgggcaggtgggtggtgtcatgatccctaggctctatagctgcaagagc
agaagacctatcctcagaggacaactggagacacctgtgactatggagtttggggaagaa
gactacctgcacaagagaaatccagccatgtttgtgttgcttcgggatgaggtgaatgtc
caccggtttactgggcttccagaaaactcccaggaatctttacagatactcatcaaattc
tctaagcccgttacaagaccctttcccatcatactgttagtaaggttctctgagaaagcc
acgccttctgattttcttgtgaagcgggtctacttctgggatgagcagactgtacaaatg
tatgtacctgctgctccatggaaaggagccaatgtgggatatttatccctattagatgct
gactatgacaggaaacctccaaacaaatatcttgctggggctgtaaactatacagtgcac
ttccagttgatccaatgtgtgttctgggacaagacagagtggcgatctgaatcctatcca
cagccaggatcttctcctgaaaaagtcaactgcagctaccatcaccttgcacctgtctct
gtcctaagaagaaagctgaatgccactcttgaagtgagcagcatttctgagtttcagagt
cacccacacaacttgctccccggtattttcagtgcatttctcttggttctttatggaatt
ttggtgagtaaaagcagatgtgtagattgtcacgagaaaaagaatccaggttttattttt
ctggaagaagatacactgcctggctaccagctgtatgcagttgtcatcgacactggcttc
cggtcaccagtcagatttacctcaaaggttttcattgttctatgtggtgaaaatggatgc
tcagaaacgaaagaactctgctgtccagagaagcccttatttggaagaaattccaggcac
accttcattctgagcatacctaaccaactgggtccactccagaagatccgcctctggcac
gacagtagtggaccttgcccatgctggttcatcagccacgtgatggtgaaggagctatgc
tcaggacaagcctggttcttctctgctcagtgctggctggcggtgagcaaattgggtggc
cgtgtcttacgagaattcttctgcctgagccatggtcttggtttctggaagcttttctat
tcaaagttcactgagtacctggaggatttccacatctggctctcactgtacagtcagccc
ccatccagaagctacctacacacacagcggcttgccgtgtccttctgcctgctgtgtgtc
tactcgtgcctcactgccctggtcactgtgcgagaccatcaacagcaccccctggatgtg
gagcccacggctatcactctggaacccttctgtatggctctgctgtgcaccctcctggcc
tgtccagttgcacagcttctgtcactgctcttcaggtgcagcaaggaagccagagggcat
ctgcaggcttcaacacagtggcctctaagaggagtgaagacagagacacctcagggccat
gattccagtgggagaccagattcaaggcagccctcaccacatcccacatcagaccttctc
ccctggactgagcaagctcggaggatagcagctagcagcagtggtgtggtctggtcaccg
ttcccaatggaggcctgcagcgataagcatcatgatctgagagagaagagccattactct
cctcccagtgcacaagctcctggcagtggttttgaagaacttgggtcccagaagtcaagg
gtctgtctgctctggtcaagctctgtggcctgggctatctctggatcagcttccctggcc
tgtggtttggggacaggattcctaggctacaggtttgtgccagtacagtgtatgtggtgg
ctatacctgctgcttctctctctggtctgctgcgcattcatcacccagccactcatgatc
tgcttggcagcacttgtctttgcttggaaacggaaacatgacaacgagttttttactgag
tctttacaagatgcgaccaagggtctggatttagaattggaagaacattccagaacccgt
gttcctctttctcctatctcctatagtcctgacactgccgaggaggctgaaagggtcttg
gctacccgacaacgagaacgccacctgcgctgggctcagacaccatccagggctaagctc
agagtgaccagggagagactgaggagagagagcatcatgcaggcagccctgagagacatg
accatgcacagcatcatgctactgttgcttttgtttatagcatatgggagattctgccca
ggtgaatattctctcaatcatgccatcaggaaagcatttataagaaaggccaatcactcc
ttgggggacctcagcagcacagaagactggtgggactggacgctgagcacactgctacat
gagctgtacccagaaagaacatctgctagagcctggggggctcagcctggagctcttgga
gggcaatgccacctaataggccccctggtggtcaaacagctgaagatttctgctggcact
gcatgtatgcctcccagaccattctcagagcttgtggaagatgtacttcctatgcacagc
aatgaccttgaccttgagaaccgaaatgtgtcccctggtagtcctgagacctgtggtgtg
aagaaagagagctacatgcatagcctaggaagaacaagacatgaagcccatgcagctctg
actgccctcagggctagcaagtggatcgaccacagcacaagggccatgtctgtgcacttc
actctctacaaccctccaacacgactcttcacaagcgtgatcctgggcacagaatgtctc
ccctcaggaggtcttgtcccctcattcctggtagagtccgtccgtatcttctacagtgac
tcagccctaaagtaccttcttatgctttctgagctgctgttcctggtattcaacatgatc
cacctctgtttccagctctgggggatgacaaccaagggcatcctcagctactggagaaaa
ccaagacactggctggagctctctatggttggagtagcactggcctactatgcagcctct
ggtcacctcactactcttgctgcgaatatcaccgaccagttccacaaaggactttatcag
aggcttgtggacatcagcctgatagtgtcatggcatcagagggcacgatgcctccaagga
atcctcttgttcctctggatgttgaaatatgttcatcttctcagctctctaagcaccatg
acacccttctcggcagtgacctgttttcctctcttcagagtcctgctggtgggggcccta
ttgctggctgcccattaccactcgcgctggtttctgctcttcactgggacactgtcacgt
ggcacctcgacagaagcattccctgggctactgcttcgatttcctgcaagaagtaaaaaa
gactcatggcacagctgtttgaagtctgaccacggagctatgcattgttactatgggacc
ctctttctgttgctggctactctgggtttcagaatgttgagagctaccttcctgactgtt
ttccaaaacagaaagtcttctcacagaaaatctctcgtgacacttaaagacattgctgtt
tacacatggcataaagtcctcacccttctggggctggaaacaactttggaagagactgaa
gtggctacagaccacatttattacctggatgaattttcaagtctcttggatgaacttctg
atgaagatcgatggtttgtctgacagcctagaattttctatcctagaaaaccaatggagg
agagcactggagtcaagggcaggtgacagtcctccagttggcatttcagagtaccaagct
actggggtagaaaacccggggctgagagatgatgaaagccacagactaaagggatgtgca
caggagaccaggaactcaaatagtgctcaagcagaggagacctga
DBGET
integrated database retrieval system
