Mus caroli (Ryukyu mouse): 110306688
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Entry
110306688 CDS
T05910
Symbol
Psma6
Name
(RefSeq) proteasome subunit alpha type-6 isoform X1
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
mcal
Mus caroli (Ryukyu mouse)
Pathway
mcal03050
Proteasome
mcal05010
Alzheimer disease
mcal05012
Parkinson disease
mcal05014
Amyotrophic lateral sclerosis
mcal05016
Huntington disease
mcal05017
Spinocerebellar ataxia
mcal05020
Prion disease
mcal05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110306688 (Psma6)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
110306688 (Psma6)
05012 Parkinson disease
110306688 (Psma6)
05014 Amyotrophic lateral sclerosis
110306688 (Psma6)
05016 Huntington disease
110306688 (Psma6)
05017 Spinocerebellar ataxia
110306688 (Psma6)
05020 Prion disease
110306688 (Psma6)
05022 Pathways of neurodegeneration - multiple diseases
110306688 (Psma6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mcal01002
]
110306688 (Psma6)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mcal03051
]
110306688 (Psma6)
Enzymes [BR:
mcal01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
110306688 (Psma6)
Peptidases and inhibitors [BR:
mcal01002
]
Threonine peptidases
Family T1: proteasome family
110306688 (Psma6)
Proteasome [BR:
mcal03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
110306688 (Psma6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Motif
Other DBs
NCBI-GeneID:
110306688
NCBI-ProteinID:
XP_021034379
Ensembl:
MGP_CAROLIEiJ_G0017759
UniProt:
A0A6P5QL64
LinkDB
All DBs
Position
12:50975085..51009217
Genome browser
AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
ALAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggggttccagcgccggttttgaccgtcacattactatcttctctcccgagggc
cgactctaccaagtagaatatgcttttaaggctattaaccagggtggacttacatctgtt
gctgtcagaggaaaggactgcgcagttattgtcacacagaagaaagtacctgacaaacta
ctggattccagcacagtgactcacttgttcaagataacggaaagcattggctgtgtgatg
acaggaatgacagctgacagcagatcccaggtacagagggcacgctacgaggcagctaat
tggaaatacaagtatggctatgagattcctgtggacatgctgtgcaaaagaattgctgat
atttctcaagtctacacacagaacgctgaaatgaggccacttggttgttgtatgatttta
atcggtatcgatgaagagcaaggccctcaagtgtacaagtgtgatcctgcaggttactac
tgtggctttaaagccacggcagcaggagttaaacaaacagagtcaaccagcttccttgaa
aaaaaagtgaagaagaaatttgattggacatttgaacagacagtggaaactgcaattaca
tgcctgtctactgttctgtcgattgatttcaaaccttcagaaatagaagttggagtagtt
acagttgaaaatcctaaattcaggattcttactgaagcagagattgacgctcaccttgtt
gctctagcagagagagactga
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integrated database retrieval system
