Mus caroli (Ryukyu mouse): 110306730
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Entry
110306730 CDS
T05910
Symbol
Snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
110306730 (Snx13)
Domain-containing proteins not elsewhere classified [BR:
mcal04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110306730 (Snx13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
110306730
NCBI-ProteinID:
XP_021034448
Ensembl:
MGP_CAROLIEiJ_G0017699
UniProt:
A0A6P5QV24
LinkDB
All DBs
Position
12:31351539..31447462
Genome browser
AA seq
969 aa
AA seq
DB search
MMLTEASLSIWGWGSLGIVLFLITFGPFVIFYLAFYILCFVGGGLVVTLLYGKTNSEKYL
EQCEHSFLPPTSSGVPKCLEEMKREARTIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYW
YYTLSDDESFLLEIRQTLQNALIQFATRSKEIDWQPYFTTRIVDDFGTHLRVFRKAQQRV
TEKDDQVKGTAEDLVETFFEVEVEMEKDVCRDLVCTSPKDEEGFLRDLCEVLLYLLLPPG
DFQSKIMRYFVREILARGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDN
IGELEAVRDKAAEELQYLRSLDTAGDDINTIKNQINSLLFVKKVCDSRIQRLQSGKEINT
VKLAANFGKLCTVPLDSILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEV
LSGRQRDGKQQTNQTKGLLRAAAVGIYEQYLSEKASPRVIVDDYLVAKLADTLNHEDPTP
EIFDDIQRKVYELMLRDERFYPSFRQNALYVRMLAELDMLKDPSFRGSDDGDGESFNGSP
TGSINLSLDDLSSVTSDDSVQLHAYISDTVYADYDPYAVAGVCNDHGKTYALYAITVHRR
NLNTEEMWKTYRRYSDFHDFHMRITEQFENLSSILKLPGKKTFNNMDRDFLEKRKKDLNA
YLQLLLTPEMMKASPALAHCVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVK
SLPDSLAEGVTKMSDNVGRMSERLGQDIKQSFFKVPPLITKTDSDPEHCRVSAQLDDNVD
DNIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPE
QVADSVKRFRDAFWPNGILAETVPCRDKAIRMRTRIAGKTKLFAIMPDELKHIIGAETTR
KGILRVFEMFQHNQLNRRMVYVFLEGFLETLFPQYKFRELFNKLHSRSKQMQKYKQKLQS
TQAPSLQKR
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgatgttaacagaggccagtctatccatatggggatggggaagccttggcattgtcctt
tttctaataacctttggaccctttgtaatattttatttggcattttatatcctctgcttt
gtgggagggggtttagtggttactcttctgtatgggaaaactaactcagaaaaataccta
gaacagtgtgaacactcatttcttcctccaacatcatctggggttcctaagtgcttagaa
gaaatgaaacgggaagccaggactataaagattgacagaagattgacgggtgccaatata
attgatgagcctctccagcaagttatccagttttccttgagggattatgtccagtactgg
tattatacattaagtgatgatgagtcatttcttcttgaaattaggcaaactcttcaaaat
gcgctcattcagtttgctactaggtcaaaagaaatagactggcagccttattttactaca
cgcattgtagatgattttggcactcacctacgagtattcagaaaggctcaacagagagta
acagagaaagatgatcaagtaaaaggtacagcagaggatctggtagaaaccttttttgaa
gttgaagttgaaatggagaaggatgtttgccgggatctagtgtgcacttctcccaaggat
gaagaaggattcctaagggatttgtgtgaggttttattatatttattgctacctcctgga
gatttccagagcaagatcatgcgatactttgtcagggaaatccttgcacgaggaattctt
cttccattaataaatcaactcagtgatcctgattatattaatcaatatgtcatatggatg
atccgtgattcaaattgcaactatgaggcctttatgaacattattaaattaagtgacaat
attggagagttagaggcagtcagagataaggcagcagaagagctacagtatcttagatcc
ttagatacagccggtgatgatatcaacactataaaaaatcaaataaatagcttattattt
gtaaagaaagtatgtgattcaagaatacaacggttacagtcaggcaaagaaataaatact
gtgaagctagcagcaaactttgggaaactttgtacagtccccttggacagcattcttgta
gacaatgttgcactacaattttttatggattatatgcagcaaactggaggccaagcacat
ctcttcttctggatgacagtggaagggtaccgggttacagcccagcaacagctcgaggtt
ctctcaggtcgccagagagacggcaaacagcagaccaaccaaaccaaaggtcttttaaga
gcagcagctgttggaatttatgagcagtatttatctgaaaaggcatctccaagagttatt
gttgatgactatttagtagcaaaattagcagatactttgaatcatgaagatccaactcca
gaaatctttgatgacattcaaagaaaggtatatgaactgatgctacgagatgaaagattt
tatccttcctttaggcagaatgcgctctatgtgcgaatgctagctgagcttgacatgtta
aaagatcctagtttcagaggatcagatgatggggatggagaatcttttaatgggtctcct
acaggaagcataaatttgtctttagatgacctttcaagtgtgacttctgatgattctgta
caacttcatgcctacatttcagacactgtatatgctgactatgacccatatgctgtggca
ggcgtttgtaatgatcatggcaagacatatgcactatatgccatcactgtacaccggcgc
aacctaaacactgaggagatgtggaaaacctatcggcgttatagtgacttccatgacttc
cacatgagaatcactgagcagtttgaaaatctgtcaagcatattgaagcttcctggtaaa
aagacgtttaacaatatggatagagattttttagaaaagaggaaaaaggatttaaatgcc
tacttgcagttactcttgactcctgaaatgatgaaggcatccccagcactggctcactgt
gtctatgatttccttgagaacaaagcctacagtaaagggaagggcgattttgctcgaaag
atggacacttttgtaaatccgcttcgcaactctatgaggaatgtttcaaatgcagtcaaa
tcccttcctgatagcttggcagaaggagtgacaaaaatgtcggacaacgtgggcaggatg
tcagagagattagggcaagacataaagcagtcattttttaaggtccctcctttaattacg
aagactgattcagatcctgaacattgtcgagtctcagctcagctcgatgataatgtggat
gacaatatcccacttagggtaatgctgcttctaatggatgaggtgtttgacttaaaagag
agaaaccagtggttgagaaggaatatcaagaatttactccagcagcttattagagctaca
tatggtgatactattaacagaaaaatagttgaccatgttgactggatgacctcaccggaa
caagtagctgactcggtgaagcgtttcagagatgcattttggcccaatggcattttagca
gagactgtcccatgcagagataaagctattcgaatgagaacaagaattgcaggaaaaaca
aaattatttgcaattatgccagatgaactgaagcacattattggagcggagacaacacgg
aaaggcattcttcgtgtgtttgaaatgtttcagcacaaccagctaaataggagaatggtg
tatgtctttttagaaggctttttagaaaccttatttccacagtataaatttcgtgaactt
ttcaacaaacttcattcaaggtcaaagcaaatgcagaaatataaacaaaaacttcaaagt
actcaagcgccttctttacaaaaaaggtga
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