KEGG   Mus caroli (Ryukyu mouse): 110306740
Entry
110306740         CDS       T05910                                 
Symbol
Snx6
Name
(RefSeq) sorting nexin-6
  KO
K17920  sorting nexin-5/6/32
Organism
mcal  Mus caroli (Ryukyu mouse)
Pathway
mcal04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:mcal00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110306740 (Snx6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mcal04131]
    110306740 (Snx6)
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:mcal04990]
    110306740 (Snx6)
Membrane trafficking [BR:mcal04131]
 Endocytosis
  Macropinocytosis
   Sorting nexins
    110306740 (Snx6)
Domain-containing proteins not elsewhere classified [BR:mcal04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   110306740 (Snx6)
SSDB
Motif
Pfam: PX Vps5 FAN1_HTH
Other DBs
NCBI-GeneID: 110306740
NCBI-ProteinID: XP_021034463
Ensembl: MGP_CAROLIEiJ_G0017749
UniProt: A0A6P5QLC1
LinkDB
Position
12:complement(50072365..50113609)
AA seq 406 aa
MMEGLDDGPDFLSEEDRGLKAINVDLQSDAALQVDISDALSERDKVKFTVHTKSSLPNFK
QNEFSVVRQHEEFIWLHDSFVENEDYAGYIIPPAPPRPDFDASREKLQKLGEGEGSMTKE
EFTKMKQELEAEYLAIFKKTVAMHEVFLCRVAAHPILRKDLNFHVFLEYNQDLSVRGKNK
KEKLEDFFKNMVKSADGVIVSGVKDVDDFFEHERTFLLEYHNRVKDASAKSDRMTRSHKS
AADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKIEARVSADEDLKLSDLLKYYL
RESQAAKDLLYRRSRSLVDYENANKALDKARAKNKDVLQAETSQQLCCQKFEKISESAKQ
ELIDFKTRRVAAFRKNLVELAELELKHAKGNLQLLQNCLAVLNGDT
NT seq 1221 nt   +upstreamnt  +downstreamnt
atgatggaaggcctggatgacggccccgacttcctctcggaggaagaccgcggacttaaa
gcaataaatgtagatctccagagtgatgctgctctgcaggtggacatttctgacgctctc
agtgagagggataaagtcaagttcactgttcacacaaagagttcattgccaaattttaag
caaaatgaattttcagtcgttcgacaacatgaggaatttatctggcttcatgattccttt
gttgaaaatgaagactatgcaggttacattatcccaccagcaccaccaagacctgatttt
gatgcttcacgggaaaaactgcagaagcttggagaaggggaagggtcgatgacaaaggaa
gaattcacaaagatgaagcaggaactggaagctgaatacctggcgatcttcaagaagaca
gttgcaatgcatgaggtgttcctgtgtcgggttgcagcgcatcctattttgagaaaagat
ttaaatttccacgtcttcttggaatataatcaagatttgagtgttcgaggaaaaaataaa
aaagaaaaactcgaggatttctttaaaaacatggttaagtcagcagatggagtcattgtt
tctggagtaaaggatgtagacgacttctttgagcacgaacgaacattccttttagaatat
cacaaccgggttaaggatgcatctgctaagtcggacagaatgacaagatctcacaaaagt
gctgctgatgattacaatagaattgggtcttcattatatgctttaggaactcaggactct
acagatatatgcaagtttttcctcaaagtttcagagctgtttgataaaacaagaaaaata
gaagctcgggtgtctgctgacgaggacctcaagctttctgacctattaaagtactacttg
cgggagtctcaagccgctaaggacctcctctatagaaggtctaggtcgctggtggactat
gaaaatgccaataaagcactggacaaggcgagagcgaaaaacaaagatgttctacaggct
gaaacttcccaacagttgtgctgtcagaagtttgaaaaaatatctgaatctgcaaaacaa
gaactgatagattttaagacaagaagagttgctgcgttcagaaaaaacttagtggaactt
gcagaactagaactgaagcatgcaaagggcaacctccagctcctgcagaactgccttgcg
gttttaaatggagacacatag

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