Mus caroli (Ryukyu mouse): 110306798
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Entry
110306798 CDS
T05910
Symbol
Taf1b
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
mcal
Mus caroli (Ryukyu mouse)
Brite
KEGG Orthology (KO) [BR:
mcal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mcal03021
]
110306798 (Taf1b)
Transcription machinery [BR:
mcal03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
110306798 (Taf1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Zn_ribbon_NOB1
Motif
Other DBs
NCBI-GeneID:
110306798
NCBI-ProteinID:
XP_021034563
Ensembl:
MGP_CAROLIEiJ_G0017644
UniProt:
A0A6P5QLJ8
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Position
12:21036847..21114875
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AA seq
586 aa
AA seq
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MDVEEVKAFRDRCSQCAAVSWGLTDEGKYYCTSCHNVTDRSEEVVSAAVIPNTKINSINR
GLRQRSKHEKGWDWYVCEGFQCILYHQAEALETLGVSPELKNEVLHNFWKRYLQKSKQAY
CKNPVRTSGGKAKVLEDSLQSSDLGSDLERLSDTTCPLESEAEFQSDPQIPKPFPVTKGS
PKSASVCSGSVDGVEYSERKEKGLVKMTVPRTLALCSLSLLWQRETITVSDLLRFVEEDR
IPYINAFKLFPEEMKVYGRDKGIFAVESWPDYEDIYKNMIEVAIFLDLPRFPDITEDCYL
HPNTLCMKYLLEVNLPDEMHTLTCQVVKLTGIGEVDFLTFDPIAKMKRAVKYDVQAMAVI
VVVLKLLFLLDDKLEWSYSDLAEAYNEEHREDTPQFDFRKWYQVMKKTFDEKRRKWEEAR
ARYAWKTKRPLYRSHIDKSVAYKKREMVENLQKQFSALVGSSPVVEKQAPSSFQFNWTEE
GTDSPCFHGHSLQGLLKMKGQSMITKNSLYWLSTQKFCKSYCKHVTTYEESNFSLSYQFI
LNIFSFLLRIKTSALHEEVSLLEKKLFEKKYNESKKSSGSKKGRKH
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaggaggtgaaagcgttcagagaccgctgttctcagtgtgctgctgtctcc
tggggccttaccgatgaaggcaaatattactgtacttcctgccacaatgtcacagatcga
tctgaggaagtggtgagtgctgcagttatccccaacaccaagatcaactccatcaacagg
gggctgagacagagaagcaagcatgagaaaggctgggattggtatgtgtgtgaaggtttc
cagtgcatactttatcaccaagcagaagccctggagaccctcggagtaagcccagaacta
aagaatgaagtcttacacaatttttggaagcgctaccttcagaagagcaagcaggcctat
tgtaaaaacccagttcgtacaagtggagggaaagccaaggtattagaagacagtctgcag
tcctcggacttgggcagtgatcttgagcggctaagtgataccacatgcccccttgaaagt
gaagcagagttccaatctgaccctcagattccaaagcctttccctgtcaccaaaggatcc
ccaaagtcagcatctgtctgctctggctctgttgatggagtggagtactccgagcggaag
gagaaggggcttgtgaagatgactgtgcccaggacacttgctctctgctctctctccttg
ctctggcagagggaaacaattacagtttcagaccttttgaggtttgttgaagaggatcgt
attccgtacataaatgcttttaagctttttccagaagagatgaaagtgtatggtcgtgac
aaaggcatctttgctgtagagtcttggcctgactatgaagacatctataaaaacatgatt
gaagttgccatatttttagatttgcctcgtttcccagacataacggaagactgctacctc
catcccaacaccttgtgtatgaaatacttactggaggtcaatctccctgatgaaatgcac
actttaacctgtcaagtagtaaagttgactggaattggagaagtggattttttgacgttt
gatcctatagctaaaatgaaaagggcagttaaatatgatgtgcaggctatggctgtcatt
gtggttgtgttgaagctgctgtttttgctggatgacaagctggaatggtcttactcagat
cttgctgaagcgtacaacgaagaacacagagaagacacgccccagtttgatttcagaaaa
tggtaccaagttatgaagaaaacttttgatgagaaaagacgaaaatgggaagaagcgagg
gccaggtatgcttggaaaaccaaaaggccactctaccgttcacacatcgataagtccgtt
gcatataagaaaagagaaatggtggagaatcttcaaaaacaatttagtgccctggttggt
tcatcaccagtggttgaaaagcaggccccttcaagttttcagttcaactggactgaagaa
ggcactgatagcccttgtttccatggacacagcctccagggactcctgaaaatgaaaggc
cagtccatgataaccaagaactccctatattggctcagtacccagaagttctgcaaaagc
tattgtaaacatgtgacaacttacgaagaatcaaatttttctttgagttaccagtttata
ctaaacatcttctccttcttactgagaataaagacctctgctctccatgaagaagtgagc
ttacttgaaaagaaactttttgaaaaaaaatacaacgaatcaaaaaagagctcaggatcc
aagaaaggaagaaaacactga
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